CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Phyra96060
(
Phytophthora ramorum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Phyra96060
T277912_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Phyra96060
Myb
31
77
GKRWTPGQDDALRRAVDEFGQRNWKAIASRVDGRNHAQCLQRWNKVL
Phyra96060
Myb
83
128
KGHWSFEEDSTLEQMVLQGCHSWGEVAAHIPGRTAKQCRERWRNHL
Phyra96060
Myb
134
178
KSPFTPEEDNIIQEGFEKMGNRWTQIAELLPGRTEDAVKLRWKAL
Links
Other
Myb/SANT
family TFs
Other
Phytophthora ramorum
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F443_16638
Phytophthora parasitica
F443_16638
N
0.896
fgenesh1_kg.C_scaffold_813000002
Phytophthora capsici
fgenesh1_kg.C_scaffold_813000002
N
0.886
fgenesh_scip_prom.46568.338
Phytophthora kernoviae
fgenesh_scip_prom.46568.338
N
0.776
HpaG800700
Hyaloperonospora arabidopsidis
HpaG800700
N
0.808
maker-pag1_scaffold_406-snap-gene-0.12
Pythium aphanidermatum
maker-pag1_scaffold_406-snap-gene-0.12
N
0.716
maker-par_contig_1799-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_1799-fgenesh-gene-0.0
N
0.752
maker-pir_contig_225-snap-gene-0.15
Pythium irregulare
maker-pir_contig_225-snap-gene-0.15
N
0.790
maker-piw_contig_308-snap-gene-0.10
Pythium iwayamai
maker-piw_contig_308-snap-gene-0.10
N
0.783
maker-piw_contig_308-snap-gene-0.9
Pythium iwayamai
maker-piw_contig_308-snap-gene-0.9
N
0.663
Physo138656
Phytophthora sojae
Physo138656
N
0.903
PITG_05989
Phytophthora infestans
PITG_05989
N
0.885
PYU1_G004815
Pythium ultimum
PYU1_G004815
N
0.797