POPTR_0016s11980 (Populus trichocarpa)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 POPTR_0016s11980 T278492_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G38090
M07055_2.00 		Arabidopsis thaliana
HHBAWNYTTATCYWNWHYNBN
NVNRDWNWRGATAARNWTVDD		 Dap-seq
OMalley et al.(2016)
At2g38090_col_a 		0.816 0.894
PK27693.1
M01285_2.00 		Cannabis sativa
NNYTATCBNN
NNVGATARNN		 PBM
Lambert et al.(2019)
pTH11302 		0.807 0.904
PK27213.1
M01284_2.00 		Cannabis sativa
NHWATCNNNN
NNNNGATWDN		 PBM
Lambert et al.(2019)
pTH10196 		0.724 0.798
PK27213.1
M02356_2.00 		Cannabis sativa
NHHATCNNNN
NNNNGATDDN		 PBM
Weirauch et al.(2014)
pTH9600 		0.724 0.798
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0016s11980.1 Myb 133 180

Links

Other Myb/SANT family TFs
Other Populus trichocarpa TFs

115 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_08282 Capronia coronata A1O1_08282 N
A1O3_03291 Capronia epimyces A1O3_03291 I
A1O5_00025 Cladophialophora psammophila A1O5_00025 N
A1O7_03671 Cladophialophora yegresii A1O7_03671 N
A1O9_03542 Exophiala aquamarina A1O9_03542 I
A1O9_13001 Exophiala aquamarina A1O9_13001 I
ACRE_088710 Acremonium chrysogenum ACRE_088710 I
AOL_s00083g362 Arthrobotrys oligospora AOL_s00083g362 N
BBA_08191 Beauveria bassiana BBA_08191 I
Bcin09g02560 Botrytis cinerea Bcin09g02560 I
BGHDH14_bgh01821 Blumeria graminis BGHDH14_bgh01821 I
CCM_00913 Cordyceps militaris CCM_00913 I
CFIO01_02322 Colletotrichum fioriniae CFIO01_02322 I
CGGC5_10205 Colletotrichum gloeosporioides CGGC5_10205 I
CH063_07213 Colletotrichum higginsianum CH063_07213 I
CHGG_00505 Chaetomium globosum CHGG_00505 I
CMQ_2744 Grosmannia clavigera CMQ_2744 I
Cob_02185 Colletotrichum orbiculare Cob_02185 I
CPUR_01702 Claviceps purpurea CPUR_01702 I
CSUB01_09138 Colletotrichum sublineola CSUB01_09138 I
CTHT_0050850 Chaetomium thermophilum CTHT_0050850 I
estExt_fgenesh1_pg.C_70327 Cryphonectria parasitica estExt_fgenesh1_pg.C_70327 I
estExt_fgenesh3_pm.C_140174 Neurospora discreta estExt_fgenesh3_pm.C_140174 I
EV44_g6283 Erysiphe necator EV44_g6283 I
e_gw1.5.1042.1 Nectria haematococca e_gw1.5.1042.1 I
F503_05733 Ophiostoma piceae uamh F503_05733 I
FFUJ_07449 Fusarium fujikuroi FFUJ_07449 I
FGRRES_17309 Fusarium graminearum FGRRES_17309 I
FOXG_05408 Fusarium oxysporum FOXG_05408 I
FOXG_14277 Fusarium oxysporum FOXG_14277 I
FPSE_00499 Fusarium pseudograminearum FPSE_00499 I
FVEG_02723 Fusarium verticillioides FVEG_02723 I
G647_04707 Cladophialophora carrionii G647_04707 N
GGTG_06292 Gaeumannomyces graminis GGTG_06292 N
GLRG_07449 Colletotrichum graminicola GLRG_07449 I
HMPREF1120_05352 Exophiala dermatitidis HMPREF1120_05352 N
HMPREF1624_07464 Sporothrix schenckii HMPREF1624_07464 I
MAC_03900 Metarhizium acridum MAC_03900 I
MAJ_05180 Metarhizium majus MAJ_05180 I
MAM_05041 Metarhizium album MAM_05041 I
MAPG_04385 Magnaporthe poae MAPG_04385 N
MBM_05016 Marssonina brunnea MBM_05016 I
MBR_04335 Metarhizium brunneum MBR_04335 I
MGG_09263 Magnaporthe oryzae MGG_09263 I
MGU_05623 Metarhizium guizhouense MGU_05623 I
NCU04663 Neurospora crassa NCU04663 D
NechaG40581 Fusarium solani NechaG40581 I
NEUTE1DRAFT_120420 Neurospora tetrasperma NEUTE1DRAFT_120420 I
OIDMADRAFT_112327 Oidiodendron maius OIDMADRAFT_112327 I
PMAA_070340 Penicillium marneffei PMAA_070340 I
PMAA_070340 Talaromyces marneffei PMAA_070340 I
PODANS_2_150 Podospora anserina PODANS_2_150 I
PV04_03866 Capronia semiimmersa PV04_03866 N
PV06_00266 Exophiala oligosperma PV06_00266 N
PV07_06437 Cladophialophora immunda PV07_06437 I
PV08_04106 Exophiala spinifera PV08_04106 N
PV10_05308 Exophiala mesophila PV10_05308 N
PV11_00815 Exophiala sideris PV11_00815 N
S40288_07421 Stachybotrys chartarum S40288_07421 I
SAPIO_CDS8637 Scedosporium apiospermum SAPIO_CDS8637 I
SBOR_3621 Sclerotinia borealis SBOR_3621 I
SMAC_08342 Sordaria macrospora SMAC_08342 I
SPBR_06325 Sporothrix brasiliensis SPBR_06325 I
SPBR_06586 Sporothrix brasiliensis SPBR_06586 N
SS1G_05371 Sclerotinia sclerotiorum SS1G_05371 I
THITE_40970 Thielavia terrestris THITE_40970 I
TRIATDRAFT_161814 Trichoderma atroviride TRIATDRAFT_161814 I
TRIREDRAFT_49372 Trichoderma reesei TRIREDRAFT_49372 I
TRIVIDRAFT_122714 Trichoderma virens TRIVIDRAFT_122714 I
TSTA_090670 Talaromyces stipitatus TSTA_090670 I
UV8b_4097 Ustilaginoidea virens UV8b_4097 I
VDAG_00161 Verticillium dahliae VDAG_00161 I
VDBG_00550 Verticillium alfalfae VDBG_00550 I
VDBG_00550 Verticillium albo atrum VDBG_00550 I
VHEMI00437 Torrubiella hemipterigena VHEMI00437 I
VHEMI03393 Torrubiella hemipterigena VHEMI03393 I
X797_011716 Metarhizium robertsii X797_011716 I
Z517_10110 Fonsecaea pedrosoi Z517_10110 N
Z519_00024 Cladophialophora bantiana Z519_00024 N