PVAR5_6000 (Byssochlamys spectabilis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 PVAR5_6000 T278931_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU01706
M02344_2.00 		Neurospora crassa
NNNAWYNNNN
NNNNRWTNNN		 PBM
Weirauch et al.(2014)
pTH9662 		0.815 0.940
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GAD97326 Myb 334 378
GAD97326 Myb 381 420

Links

Other Myb/SANT family TFs
Other Byssochlamys spectabilis TFs

119 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30204.m001750 Ricinus communis 30204.m001750 N
AMTR_s00029p00248140 Amborella trichopoda AMTR_s00029p00248140 N
AMTR_s00045p00026940 Amborella trichopoda AMTR_s00045p00026940 N
BGIOSGA017449 Oryza indica BGIOSGA017449 N
BGIOSGA027556 Oryza indica BGIOSGA027556 N
BRADI2G14372 Brachypodium distachyon BRADI2G14372 N
BRADI2G41720 Brachypodium distachyon BRADI2G41720 N
cassava349.valid.m1 Manihot esculenta cassava349.valid.m1 N
Cla015187 Citrullus lanatus Cla015187 N
Cucsa.078210 Cucumis sativus Cucsa.078210 N
Eucgr.K02162 Eucalyptus grandis Eucgr.K02162 N
F775_03250 Aegilops tauschii F775_03250 N
gene17608-v1.0-hybrid Fragaria vesca gene17608-v1.0-hybrid N
GLYMA03G18725 Glycine max GLYMA03G18725 N
GLYMA08G46710 Glycine max GLYMA08G46710 N
GLYMA16G14060 Glycine max GLYMA16G14060 N
Gorai.001G187100 Gossypium raimondii Gorai.001G187100 N
Gorai.007G155000 Gossypium raimondii Gorai.007G155000 N
GRMZM2G018048 Zea mays GRMZM2G018048 N
GSMUA_Achr11G13340_001 Musa acuminata GSMUA_Achr11G13340_001 N
GSMUA_Achr1G21080_001 Musa acuminata GSMUA_Achr1G21080_001 N
LPERR11G18970 Leersia perrieri LPERR11G18970 N
Lus10011850.g Linum usitatissimum Lus10011850.g N
Lus10022788.g Linum usitatissimum Lus10022788.g N
MDP0000155726 Malus domestica MDP0000155726 N
MDP0000250529 Malus domestica MDP0000250529 N
MLOC_60761 Hordeum vulgare MLOC_60761 N
MTR_7g056603 Medicago truncatula MTR_7g056603 N
OB01G30180 Oryza brachyantha OB01G30180 N
OB05G35500 Oryza brachyantha OB05G35500 N
OBART05G28000 Oryza barthii OBART05G28000 N
OBART08G04660 Oryza barthii OBART08G04660 N
OGLUM05G29460 Oryza glumaepatula OGLUM05G29460 N
OGLUM08G04910 Oryza glumaepatula OGLUM08G04910 N
OLONG_007975 Oryza longistaminata OLONG_007975 N
OLONG_015531 Oryza longistaminata OLONG_015531 N
OMERI05G23880 Oryza meridionalis OMERI05G23880 N
OMERI08G04670 Oryza meridionalis OMERI08G04670 N
ONIVA05G29890 Oryza nivara ONIVA05G29890 N
ONIVA08G04510 Oryza nivara ONIVA08G04510 N
OPUNC05G25580 Oryza punctata OPUNC05G25580 N
OPUNC05G25600 Oryza punctata OPUNC05G25600 N
OPUNC08G04510 Oryza punctata OPUNC08G04510 N
ORUFI05G29980 Oryza rufipogon ORUFI05G29980 N
ORUFI08G05170 Oryza rufipogon ORUFI08G05170 N
OS08G0177300 Oryza sativa OS08G0177300 N
Pavir.J00429 Panicum virgatum Pavir.J00429 N
Pavir.J03231 Panicum virgatum Pavir.J03231 N
PDK_20s1355591g002 Phoenix dactylifera PDK_20s1355591g002 N
Pm020347 Prunus mume Pm020347 N
PRUPE_ppa000065mg Prunus persica PRUPE_ppa000065mg N
SapurV1A.0342s0100 Salix purpurea SapurV1A.0342s0100 N
Si020947m.g Setaria italica Si020947m.g N
TCM_002924 Theobroma cacao TCM_002924 N
Traes_1DL_7773A9BFB Triticum aestivum Traes_1DL_7773A9BFB N
Traes_3AL_06889C77D Triticum aestivum Traes_3AL_06889C77D N
Traes_3DL_FC1A52B36 Triticum aestivum Traes_3DL_FC1A52B36 N
TRIUR3_17785 Triticum urartu TRIUR3_17785 N
TRIUR3_27363 Triticum urartu TRIUR3_27363 N
VIT_07s0005g06680 Vitis vinifera VIT_07s0005g06680 N