CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SKUD_201904
(
Saccharomyces kudriavzevii
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
SKUD_201904
T279945_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TBF1
M00065_2.00
Saccharomyces cerevisiae
ARCCCTAN
NTAGGGYT
PBM
Badis et al.(2008)
TBF1_2078
0.909
1.000
TBF1
M01562_2.00
Saccharomyces cerevisiae
NNWRCCCTRN
NYAGGGYWNN
PBM
Zhu et al.(2009)
Tbf1
0.909
1.000
TBF1
M07492_2.00
Saccharomyces cerevisiae
WRCCCTAN
NTAGGGYW
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0403.1
0.909
1.000
TBF1
M08597_2.00
Saccharomyces cerevisiae
DHYYAACCCTANBSV
BSVNTAGGGTTRRDH
Misc
DeBoer et al.(2011)
YPL128C_770
0.909
1.000
TBF1
M11065_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$TBF1_02
0.909
1.000
TBF1
M11066_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$TBF1_03
0.909
1.000
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EJT44090
Myb
409
464
KRTWSKEEEEALVEGLKEVGPSWSKILDLYGPGGKITENLKNRTQVQLKDKARNWK
Links
Other
Myb/SANT
family TFs
Other
Saccharomyces kudriavzevii
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Eucgr.B00713
Eucalyptus grandis
Eucgr.B00713
I
MDP0000137325
Malus domestica
MDP0000137325
I
MDP0000140864
Malus domestica
MDP0000140864
N
MDP0000183948
Malus domestica
MDP0000183948
I
MDP0000442310
Malus domestica
MDP0000442310
I
MDP0000710285
Malus domestica
MDP0000710285
I
MDP0000788304
Malus domestica
MDP0000788304
N
MDP0000907218
Malus domestica
MDP0000907218
N
Pm023735
Prunus mume
Pm023735
I
Pm023738
Prunus mume
Pm023738
I
Pm028604
Prunus mume
Pm028604
I
Pm028605
Prunus mume
Pm028605
I
Pm028606
Prunus mume
Pm028606
I
Pm028607
Prunus mume
Pm028607
I
PRUPE_ppa015634mg
Prunus persica
PRUPE_ppa015634mg
I
PRUPE_ppa016220mg
Prunus persica
PRUPE_ppa016220mg
I
PRUPE_ppa022165mg
Prunus persica
PRUPE_ppa022165mg
I
PRUPE_ppa022201mg
Prunus persica
PRUPE_ppa022201mg
I
PRUPE_ppa025417mg
Prunus persica
PRUPE_ppa025417mg
I
PRUPE_ppa027182mg
Prunus persica
PRUPE_ppa027182mg
I