TCM_028884 (Theobroma cacao)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 TCM_028884 T280572_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK29550.1
M02358_2.00 		Cannabis sativa
NNHDATCYNN
NNRGATHDNN		 PBM
Weirauch et al.(2014)
pTH9595 		0.899 0.979
AT3G16350
M01078_2.00 		Arabidopsis thaliana
NYTATCYDNN
NNHRGATARN		 PBM
Sullivan et al.(2014)
pTH7149 		0.889 0.936
fgenesh1_pg.scaffold_70000111
M02342_2.00 		Physcomitrella patens
NNHNATCBN
NVGATNDNN		 PBM
Weirauch et al.(2014)
pTH8492 		0.888 0.936
PK23829.1
M02355_2.00 		Cannabis sativa
VTTATCCD
HGGATAAB		 PBM
Weirauch et al.(2014)
pTH9592 		0.881 0.915
PK17526.1
M02353_2.00 		Cannabis sativa
NNTTATCCAN
NTGGATAANN		 PBM
Weirauch et al.(2014)
pTH9588 		0.869 0.872
PK00738.1
M02346_2.00 		Cannabis sativa
NYWATCYDNN
NNHRGATWRN		 PBM
Weirauch et al.(2014)
pTH9487 		0.850 0.936
KUA1
M02312_2.00 		Arabidopsis thaliana
NNTTATCCDN
NHGGATAANN		 PBM
Weirauch et al.(2014)
pTH7647 		0.829 0.872
KUA1
M07136_2.00 		Arabidopsis thaliana
WWHHTTATCCAHWW
WWDTGGATAADDWW		 Dap-seq
OMalley et al.(2016)
At5g47390_colamp_a 		0.829 0.872
KUA1
M07137_2.00 		Arabidopsis thaliana
HHWDYHTTATCCAHW
WDTGGATAADRHWDD		 Dap-seq
OMalley et al.(2016)
At5g47390_col_b 		0.829 0.872
AT5G61620
M07149_2.00 		Arabidopsis thaliana
WWHHTTATCCAHWWN
NWWDTGGATAADDWW		 Dap-seq
OMalley et al.(2016)
AT5G61620_col_a 		0.823 0.872
AT5G61620
M07150_2.00 		Arabidopsis thaliana
YHTTATCCAHW
WDTGGATAADR		 Dap-seq
OMalley et al.(2016)
AT5G61620_colamp_a 		0.823 0.872
AT1G19000
M02287_2.00 		Arabidopsis thaliana
NYTATCYDNN
NNHRGATARN		 PBM
Weirauch et al.(2014)
pTH7120 		0.819 0.872
AT1G19000
M07012_2.00 		Arabidopsis thaliana
HDYHTTATCCAHWW
WWDTGGATAADRHD		 Dap-seq
OMalley et al.(2016)
At1g19000_col_a 		0.819 0.872
AT1G19000
M07013_2.00 		Arabidopsis thaliana
WDYNTTATCCAHWW
WWDTGGATAANRHW		 Dap-seq
OMalley et al.(2016)
At1g19000_colamp_a 		0.819 0.872
AT5G56840
M07144_2.00 		Arabidopsis thaliana
WWYMTTATCCAWWWN
NWWWTGGATAAKRWW		 Dap-seq
OMalley et al.(2016)
AT5G56840_col_a 		0.778 0.851
AT5G56840
M07145_2.00 		Arabidopsis thaliana
HHHWWYHTTATCCWHW
WDWGGATAADRWWDDD		 Dap-seq
OMalley et al.(2016)
AT5G56840_colamp_a 		0.778 0.851
0600010132
M02360_2.00 		Ostreococcus tauri
NNVTTATCCDNNN
NNNHGGATAABNN		 PBM
Weirauch et al.(2014)
pTH9441 		0.772 0.872
AT3G10580
M07072_2.00 		Arabidopsis thaliana
AWBCTTATCYWHWHH
DDWDWRGATAAGVWT		 Dap-seq
OMalley et al.(2016)
AT3G10580_col_a 		0.759 0.702
AT3G10580
M07073_2.00 		Arabidopsis thaliana
CCGAWAAWNTCGGDD
HHCCGANWTTWTCGG		 Dap-seq
OMalley et al.(2016)
AT3G10580_colamp_a 		0.759 0.702
AT1G74840
M02291_2.00 		Arabidopsis thaliana
NGWTATCCRNN
NNYGGATAWCN		 PBM
Weirauch et al.(2014)
pTH7074 		0.749 0.830
AT1G74840
M07037_2.00 		Arabidopsis thaliana
HHTTATCCAHW
WDTGGATAADD		 Dap-seq
OMalley et al.(2016)
At1g74840_col100_a 		0.749 0.830
AT1G74840
M07038_2.00 		Arabidopsis thaliana
HWNHTTATCCAHWW
WWDTGGATAADNWD		 Dap-seq
OMalley et al.(2016)
At1g74840_colamp_a 		0.749 0.830
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY26924 Myb 110 157

Links

Other Myb/SANT family TFs
Other Theobroma cacao TFs

596 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R008906 Calypte anna Aan_R008906 I 0.000
Afo_R002309 Aptenodytes forsteri Afo_R002309 I 0.000
Alligator_sinensis_CCG003243.1 Alligator sinensis Alligator_sinensis_CCG003243.1 I 0.000
Alligator_sinensis_CCG015770.1 Alligator sinensis Alligator_sinensis_CCG015770.1 I 0.000
A_06545 Schistosoma haematobium A_06545 I 0.000
CapteG223373 Capitella teleta CapteG223373 I 0.000
CGI_10026447 Crassostrea gigas CGI_10026447 I 0.000
CGI_10028896 Crassostrea gigas CGI_10028896 I 0.000
Cmyd_10004342 Chelonia mydas Cmyd_10004342 I 0.000
csin104552 Clonorchis sinensis csin104552 I 0.000
ECANG7_04323 Echinococcus canadensis ECANG7_04323 I 0.000
EmuJ_000497100 Echinococcus multilocularis EmuJ_000497100 I 0.000
CREB3L1 Anolis carolinensis ENSACAG00000004538 I 0.000
ENSAMEG00000006633 Ailuropoda melanoleuca ENSAMEG00000006633 I 0.000
ENSAMXG00000011038 Astyanax mexicanus ENSAMXG00000011038 I 0.000
ENSAMXG00000021541 Astyanax mexicanus ENSAMXG00000021541 I 0.000
ENSAPLG00000000926 Anas platyrhynchos ENSAPLG00000000926 I 0.000
CREB3L1 Bos taurus ENSBTAG00000006143 I 0.000
CREB3L1 Canis familiaris ENSCAFG00000009282 I 0.000
creb/atf-a Ciona intestinalis ENSCING00000005364 I 0.000
CREB3L1 Callithrix jacchus ENSCJAG00000011726 I 0.000
CREB3L1 Cavia porcellus ENSCPOG00000010073 I 0.000
ENSCSAG00000005658 Chlorocebus sabaeus ENSCSAG00000005658 I 0.000
ENSCSAVG00000008562 Ciona savignyi ENSCSAVG00000008562 I 0.000
creb3l1 Danio rerio ENSDARG00000015793 I 0.000
CREB3L1 Dasypus novemcinctus ENSDNOG00000010500 I 0.000
CREB3L1 Equus caballus ENSECAG00000018306 I 0.000
ENSFALG00000000900 Ficedula albicollis ENSFALG00000000900 I 0.000
ENSFALG00000006242 Ficedula albicollis ENSFALG00000006242 I 0.000
CREB3L1 Felis catus ENSFCAG00000018794 I 0.000
CREB3L1 Homo sapiens ENSG00000157613 D 0.000
CREB3L1 Gallus gallus ENSGALG00000008393 I 0.000
CREB3L1 Gorilla gorilla ENSGGOG00000015181 I 0.000
ENSLACG00000007675 Latimeria chalumnae ENSLACG00000007675 I 0.000
CREB3L1 Loxodonta africana ENSLAFG00000005092 I 0.000
ENSLOCG00000005600 Lepisosteus oculatus ENSLOCG00000005600 I 0.000
ENSMEUG00000013573 Macropus eugenii ENSMEUG00000013573 I 0.000
CREB3L1 Meleagris gallopavo ENSMGAG00000011042 I 0.000
CREB3L3 Myotis lucifugus ENSMLUG00000008703 I 0.000
CREB3L1 Myotis lucifugus ENSMLUG00000009820 I 0.000
CREB3L1 Macaca mulatta ENSMMUG00000018571 I 0.000
CREB3L3 Monodelphis domestica ENSMODG00000000817 I 0.000
CREB3L1 Monodelphis domestica ENSMODG00000019888 I 0.000
ENSMPUG00000005639 Mustela putorius furo ENSMPUG00000005639 I 0.000
Creb3l1 Mus musculus ENSMUSG00000027230 I 0.000
CREB3L1 Oryctolagus cuniculus ENSOCUG00000004418 I 0.000
CREB3L1 Otolemur garnettii ENSOGAG00000008829 I 0.000
ENSONIG00000015219 Oreochromis niloticus ENSONIG00000015219 I 0.000
ENSORLG00000006015 Oryzias latipes ENSORLG00000006015 I 0.000
creb3l2 Oryzias latipes ENSORLG00000016776 I 0.000
ENSP00000288400 Macaca fascicularis ENSP00000288400 I 0.000
ENSP00000288400-D1 Bos grunniens ENSP00000288400-D1 I 0.000
ENSPANG00000015384 Papio anubis ENSPANG00000015384 I 0.000
CREB3L1 Procavia capensis ENSPCAG00000006313 I 0.000
ENSPFOG00000007076 Poecilia formosa ENSPFOG00000007076 I 0.000
ENSPSIG00000004461 Pelodiscus sinensis ENSPSIG00000004461 I 0.000
CREB3L1 Pan troglodytes ENSPTRG00000003543 I 0.000
CREB3L1 Pteropus vampyrus ENSPVAG00000016161 I 0.000
Creb3l1 Rattus norvegicus ENSRNOG00000005413 I 0.000
ENSSARG00000011575 Sorex araneus ENSSARG00000011575 I 0.000
ENSSHAG00000015230 Sarcophilus harrisii ENSSHAG00000015230 I 0.000
CREB3L1 Sus scrofa ENSSSCG00000013263 I 0.000
ENSSTOG00000012697 Ictidomys tridecemlineatus ENSSTOG00000012697 I 0.000
CREB3L1 Taeniopygia guttata ENSTGUG00000010669 I 0.000
ENSTRUG00000007014 Takifugu rubripes ENSTRUG00000007014 I 0.000
creb3l2 Takifugu rubripes ENSTRUG00000013114 I 0.000
CREB3L1 Tursiops truncatus ENSTTRG00000016515 I 0.000
CREB3L1 Vicugna pacos ENSVPAG00000008868 I 0.000
ENSXMAG00000004363 Xiphophorus maculatus ENSXMAG00000004363 I 0.000
estExt_fgenesh2_pg.C_2260058 Branchiostoma floridae estExt_fgenesh2_pg.C_2260058 I 0.000
estExt_fgenesh2_pg.C_290087 Branchiostoma floridae estExt_fgenesh2_pg.C_290087 I 0.000
Gfo_R014160 Geospiza fortis Gfo_R014160 I 0.000
Myotis_brandtii_CREB3L1_10025503 Myotis brandtii Myotis_brandtii_CREB3L1_10025503 I 0.000
Myotis_brandtii_CREB3L3_10016301 Myotis brandtii Myotis_brandtii_CREB3L3_10016301 I 0.000
Ocbimv22006104m.g Octopus bimaculoides Ocbimv22006104m.g I 0.000
Ogr06733 Ophisaurus gracilis Ogr06733 I 0.000
Ogr17869 Ophisaurus gracilis Ogr17869 I 0.000
Pvit_08659 Pogona vitticeps Pvit_08659 I 0.000
Pvit_09828 Pogona vitticeps Pvit_09828 I 0.000
Sakowv30020964m.g Saccoglossus kowalevskii Sakowv30020964m.g I 0.000
Sjc_0112190 Schistosoma japonicum Sjc_0112190 I 0.000
Smp_151280 Schistosoma mansoni Smp_151280 I 0.000
T265_10456 Opisthorchis viverrini T265_10456 I 0.000
TTAC_0000200101 Hydatigera taeniaeformis TTAC_0000200101 I 0.000
creb3 Xenopus tropicalis XB-GENE-959045 I 0.000
creb3.S Xenopus laevis XB-GENE-959048 I 0.000