TCM_042474 (Theobroma cacao)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 TCM_042474 T280642_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.695 0.763
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.695 0.763
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.695 0.763
PK28565.1
M02357_2.00 		Cannabis sativa
TAACBGTY
RACVGTTA		 PBM
Weirauch et al.(2014)
pTH9653 		0.679 0.785
AtMYB70
M01071_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH8588 		0.679 0.763
AtMYB70
M07048_2.00 		Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR		 Dap-seq
OMalley et al.(2016)
MYB70_col_a 		0.679 0.763
MYB73
M07114_2.00 		Arabidopsis thaliana
TAACBGWHWHW
WDWDWCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB73_col_a 		0.674 0.763
F3A4.140
M02299_2.00 		Arabidopsis thaliana
YAACBGYY
RRCVGTTR		 PBM
Weirauch et al.(2014)
pTH7112 		0.669 0.753
F3A4.140
M07095_2.00 		Arabidopsis thaliana
TAACBGYHWHNNHNN
NNDNNDWDRCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB77_col_a 		0.669 0.753
F3A4.140
M07096_2.00 		Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV
BKTWWDWTASGGTTRCGGTT		 Dap-seq
OMalley et al.(2016)
MYB77_colamp_a 		0.669 0.753
F3A4.140
M02701_2.00 		Arabidopsis thaliana
SYAACYGYCVHBN
NVDBGRCRGTTRS		 SELEX
Mathelier et al.(2014)
MA0575.1 		0.669 0.753
F3A4.140
M11044_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB77_01 		0.669 0.753
OS02G0187700
M02327_2.00 		Oryza sativa
NTAMCKGTHN
NDACMGKTAN		 PBM
Weirauch et al.(2014)
pTH8645 		0.661 0.763
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY17728 Myb 9 55
EOY17728 Myb 61 106

Links

Other Myb/SANT family TFs
Other Theobroma cacao TFs

278 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Afo_R005482 Aptenodytes forsteri Afo_R005482 N
Brh_R007650 Buceros rhinoceros Brh_R007650 N
USF3 Anolis carolinensis ENSACAG00000006745 N
ENSAMEG00000005235 Ailuropoda melanoleuca ENSAMEG00000005235 N
USF3 Bos taurus ENSBTAG00000021000 N
USF3 Canis familiaris ENSCAFG00000010692 N
USF3 Callithrix jacchus ENSCJAG00000020264 N
ENSCPOG00000006428 Cavia porcellus ENSCPOG00000006428 N
ENSCSAG00000006785 Chlorocebus sabaeus ENSCSAG00000006785 N
USF3 Dasypus novemcinctus ENSDNOG00000040900 N
USF3 Equus caballus ENSECAG00000024549 N
ENSFALG00000005129 Ficedula albicollis ENSFALG00000005129 N
USF3 Felis catus ENSFCAG00000004876 N
USF3 Homo sapiens ENSG00000176542 N
ENSGALG00000014808 Gallus gallus ENSGALG00000014808 N
USF3 Gorilla gorilla ENSGGOG00000001005 N
ENSLACG00000009844 Latimeria chalumnae ENSLACG00000009844 N
USF3 Loxodonta africana ENSLAFG00000009455 N
ENSLOCG00000003056 Lepisosteus oculatus ENSLOCG00000003056 N
USF3 Meleagris gallopavo ENSMGAG00000014246 N
USF3 Myotis lucifugus ENSMLUG00000004274 N
USF3 Monodelphis domestica ENSMODG00000018158 N
Usf3 Mus musculus ENSMUSG00000068284 N
ENSNLEG00000004615 Nomascus leucogenys ENSNLEG00000004615 N
ENSOARG00000019468 Ovis aries ENSOARG00000019468 N
USF3 Oryctolagus cuniculus ENSOCUG00000013550 N
USF3 Otolemur garnettii ENSOGAG00000032665 N
USF3 Ochotona princeps ENSOPRG00000014253 N
ENSP00000420721 Macaca fascicularis ENSP00000420721 N
ENSP00000420721-D1 Bos grunniens ENSP00000420721-D1 N
ENSPANG00000019193 Papio anubis ENSPANG00000019193 N
ENSPPYG00000013537 Pongo abelii ENSPPYG00000013537 N
USF3 Pan troglodytes ENSPTRG00000030159 N
USF3 Pteropus vampyrus ENSPVAG00000006151 N
Usf3 Rattus norvegicus ENSRNOG00000027756 N
ENSSHAG00000006667 Sarcophilus harrisii ENSSHAG00000006667 N
USF3 Sus scrofa ENSSSCG00000011918 N
ENSSTOG00000029223 Ictidomys tridecemlineatus ENSSTOG00000029223 N
ENSTGUG00000013363 Taeniopygia guttata ENSTGUG00000013363 N
ENSTGUG00000013682 Taeniopygia guttata ENSTGUG00000013682 N
USF3 Tursiops truncatus ENSTTRG00000000281 N
USF3 Vicugna pacos ENSVPAG00000011950 N
Gfo_R000246 Geospiza fortis Gfo_R000246 N
Myotis_brandtii_KIAA2018_10016078 Myotis brandtii Myotis_brandtii_KIAA2018_10016078 N
Pvit_04479 Pogona vitticeps Pvit_04479 N
Tal_R000800 Tyto alba Tal_R000800 N
usf3 Xenopus tropicalis XB-GENE-6459248 N