Traes_2DL_64EAA3388 (Triticum aestivum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Traes_2DL_64EAA3388 T280938_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NIGT1
M02328_2.00 		Oryza sativa
NNKATHCNNN
NNNGDATMNN		 PBM
Weirauch et al.(2014)
pTH8646 		0.821 0.851
HHO3
M02289_2.00 		Arabidopsis thaliana
NWGATWCBNN
NNVGWATCWN		 PBM
Weirauch et al.(2014)
pTH7278 		0.813 0.851
HHO3
M07016_2.00 		Arabidopsis thaliana
NNDHNNAAKATTCY
RGAATMTTNNDHNN		 Dap-seq
OMalley et al.(2016)
At1g25550_colamp_a 		0.813 0.851
HHO3
M07017_2.00 		Arabidopsis thaliana
HNNAAKATTCY
RGAATMTTNND		 Dap-seq
OMalley et al.(2016)
At1g25550_col 		0.813 0.851
HHO2
M02290_2.00 		Arabidopsis thaliana
NNKATHCNNN
NNNGDATMNN		 PBM
Weirauch et al.(2014)
pTH7115 		0.795 0.830
HHO2
M07029_2.00 		Arabidopsis thaliana
AKATTCY
RGAATMT		 Dap-seq
OMalley et al.(2016)
At1g68670_colamp_a 		0.795 0.830
HHO2
M07030_2.00 		Arabidopsis thaliana
RDATYNNAGATTC
GAATCTNNRATHY		 Dap-seq
OMalley et al.(2016)
At1g68670_col 		0.795 0.830
PK19779.1
M02354_2.00 		Cannabis sativa
NNKATNCNNN
NNNGNATMNN		 PBM
Weirauch et al.(2014)
pTH9610 		0.790 0.851
HHO6
M07024_2.00 		Arabidopsis thaliana
GAATCTNNDAT
ATHNNAGATTC		 Dap-seq
OMalley et al.(2016)
AT1G49560_col_a 		0.785 0.851
HHO6
M07025_2.00 		Arabidopsis thaliana
DGAATCTHNGATHCN
NGDATCNDAGATTCH		 Dap-seq
OMalley et al.(2016)
AT1G49560_colamp_a 		0.785 0.851
EFM
M07044_2.00 		Arabidopsis thaliana
NNGAATATTCY
RGAATATTCNN		 Dap-seq
OMalley et al.(2016)
At2g03500_col_a 		0.767 0.851
EFM
M07045_2.00 		Arabidopsis thaliana
RGAATCHWAGATTC
GAATCTWDGATTCY		 Dap-seq
OMalley et al.(2016)
At2g03500_colamp_a 		0.767 0.851
PK14402.1
M02352_2.00 		Cannabis sativa
NDWGATTCSNN
NNSGAATCWHN		 PBM
Weirauch et al.(2014)
pTH9491 		0.731 0.851
HRS1
M02284_2.00 		Arabidopsis thaliana
AGATTCYN
NRGAATCT		 PBM
Weirauch et al.(2014)
pTH7118 		0.724 0.809
HRS1
M01068_2.00 		Arabidopsis thaliana
NAGATTCBNN
NNVGAATCTN		 PBM
Sullivan et al.(2014)
pTH7648 		0.724 0.809
HRS1
M07004_2.00 		Arabidopsis thaliana
NDDWWVNAAKATTCY
RGAATMTTNBWWHHN		 Dap-seq
OMalley et al.(2016)
At1g13300_col_a 		0.724 0.809
HHO5
M07112_2.00 		Arabidopsis thaliana
HNDAAGATTCH
DGAATCTTHND		 Dap-seq
OMalley et al.(2016)
AT4G37180_col_a 		0.709 0.851
HHO5
M07113_2.00 		Arabidopsis thaliana
NNDAAGATTCY
RGAATCTTHNN		 Dap-seq
OMalley et al.(2016)
AT4G37180_colamp_a 		0.709 0.851
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_2DL_64EAA3388.1 Myb 235 286

Links

Other Myb/SANT family TFs
Other Triticum aestivum TFs

359 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA011179 Oryza indica BGIOSGA011179 N
F775_01009 Aegilops tauschii F775_01009 N
F775_04526 Aegilops tauschii F775_04526 N
LPERR03G08340 Leersia perrieri LPERR03G08340 N
MLOC_56065 Hordeum vulgare MLOC_56065 N
OB03G19470 Oryza brachyantha OB03G19470 N
OBART03G09330 Oryza barthii OBART03G09330 N
OGLUM03G09410 Oryza glumaepatula OGLUM03G09410 N
OMERI03G08710 Oryza meridionalis OMERI03G08710 N
ONIVA02G39270 Oryza nivara ONIVA02G39270 N
OPUNC03G08950 Oryza punctata OPUNC03G08950 N
ORUFI03G09460 Oryza rufipogon ORUFI03G09460 N
Traes_4BL_2F534B325 Triticum aestivum Traes_4BL_2F534B325 N
Traes_4DL_9477862E8 Triticum aestivum Traes_4DL_9477862E8 N
Traes_4DL_F822F371E Triticum aestivum Traes_4DL_F822F371E N