Traes_6BL_5A2DB8F78 (Triticum aestivum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Traes_6BL_5A2DB8F78 T281245_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB92
M07123_2.00 		Arabidopsis thaliana
NHHACCTAMY
RKTAGGTDDN		 Dap-seq
OMalley et al.(2016)
MYB92_100ng20cy_b 		0.833 0.839
MYB92
M07124_2.00 		Arabidopsis thaliana
NNNNWNNYYYACCWAMYHH
DDRKTWGGTRRRNNWNNNN		 Dap-seq
OMalley et al.(2016)
MYB92_colamp_a 		0.833 0.839
AtMYB93
M07020_2.00 		Arabidopsis thaliana
HDNYYYAMCWAMYHHHHHHHH
DDDDDDDDRKTWGKTRRRNHD		 Dap-seq
OMalley et al.(2016)
MYB93_col_a 		0.798 0.892
AtMYB93
M07021_2.00 		Arabidopsis thaliana
NNHNBYYYAMCWAMY
RKTWGKTRRRVNDNN		 Dap-seq
OMalley et al.(2016)
MYB93_colamp_a 		0.798 0.892
MYB107
M07061_2.00 		Arabidopsis thaliana
NDDWDBBYYACCWAMYHH
DDRKTWGGTRRVVHWHHN		 Dap-seq
OMalley et al.(2016)
MYB107_col_a 		0.777 0.839
MYB107
M07062_2.00 		Arabidopsis thaliana
WNBYYYACCWAMYH
DRKTWGGTRRRVNW		 Dap-seq
OMalley et al.(2016)
MYB107_colamp_a 		0.777 0.839
MYB106
M11040_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G01140_01 		0.771 0.817
AtMYB17
M07099_2.00 		Arabidopsis thaliana
YYYACCWACCWHHHH
DDDDWGGTWGGTRRR		 Dap-seq
OMalley et al.(2016)
MYB17_colamp_a 		0.696 0.742
PK28187.1
M01286_2.00 		Cannabis sativa
TACCTACC
GGTAGGTA		 PBM
Lambert et al.(2019)
pTH11305 		0.682 0.806
AtMYB41
M07109_2.00 		Arabidopsis thaliana
DHDBBYYACCTAMYW
WRKTAGGTRRVVHDH		 Dap-seq
OMalley et al.(2016)
MYB41_col_a 		0.682 0.796
MYB55
M00876_2.00 		Arabidopsis thaliana
ACCWAMCD
HGKTWGGT		 PBM
Franco-Zorrilla et al.(2014)
MYB55 		0.676 0.667
MYB55
M07102_2.00 		Arabidopsis thaliana
HNNNHBYAMCWAMCD
HGKTWGKTRVDNNND		 Dap-seq
OMalley et al.(2016)
MYB55_colamp_a 		0.676 0.667
MYB55
M07103_2.00 		Arabidopsis thaliana
NYNYAMCHACCRHH
DDYGGTDGKTRNRN		 Dap-seq
OMalley et al.(2016)
MYB55_col 		0.676 0.667
MYB39
M07106_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_col_a 		0.674 0.753
MYB39
M07107_2.00 		Arabidopsis thaliana
NYYYACCWAMYWHHHHHHHNH
DNDDDDDDDWRKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_colamp_a 		0.674 0.753
MYB58
M07005_2.00 		Arabidopsis thaliana
NNYYYACCWAMCHHH
DDDGKTWGGTRRRNN		 Dap-seq
OMalley et al.(2016)
MYB58_col_a 		0.665 0.677
MYB58
M07006_2.00 		Arabidopsis thaliana
HNNYHYACCWAMCHHHNNNNH
DNNNNDDDGKTWGGTRDRNND		 Dap-seq
OMalley et al.(2016)
MYB58_colamp_a 		0.665 0.677
ATMYB13
M06999_2.00 		Arabidopsis thaliana
HYCACCWACCHHHNH
DNDDDGGTWGGTGRD		 Dap-seq
OMalley et al.(2016)
MYB13_col_a 		0.661 0.742
ATMYB13
M07000_2.00 		Arabidopsis thaliana
BYCACCWACCHHHNNHNN
NNDNNDDDGGTWGGTGRV		 Dap-seq
OMalley et al.(2016)
MYB13_colamp_a 		0.661 0.742
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_6BL_5A2DB8F78.1 Myb 14 61
Traes_6BL_5A2DB8F78.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Triticum aestivum TFs

776 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28219.m000090 Ricinus communis 28219.m000090 I
Aquca_024_00080 Aquilegia coerulea Aquca_024_00080 I
NAC019 Arabidopsis thaliana AT1G52890 D
NAC055 Arabidopsis thaliana AT3G15500 D
RD26 Arabidopsis thaliana AT4G27410 I
Bo1g048300 Brassica oleracea Bo1g048300 I
Bo1g128450 Brassica oleracea Bo1g128450 I
Bo3g066850 Brassica oleracea Bo3g066850 I
Bo5g127040 Brassica oleracea Bo5g127040 I
Bo6g030940 Brassica oleracea Bo6g030940 I
Bo7g111390 Brassica oleracea Bo7g111390 I
Bostr.0124s0082 Boechera stricta Bostr.0124s0082 I
Bostr.28625s0149 Boechera stricta Bostr.28625s0149 I
Bostr.7867s0562 Boechera stricta Bostr.7867s0562 I
Bra001596 Brassica rapa Bra001596 I
Bra018998 Brassica rapa Bra018998 I
Bra019052 Brassica rapa Bra019052 I
Bra021113 Brassica rapa Bra021113 I
Bra026353 Brassica rapa Bra026353 I
Bra027238 Brassica rapa Bra027238 I
Cagra.0007s0097 Capsella grandiflora Cagra.0007s0097 I
Cagra.0570s0027 Capsella grandiflora Cagra.0570s0027 I
Cagra.0946s0025 Capsella grandiflora Cagra.0946s0025 I
Carubv10005353m.g Capsella rubella Carubv10005353m.g I
Carubv10009816m.g Capsella rubella Carubv10009816m.g I
Carubv10014211m.g Capsella rubella Carubv10014211m.g I
cassava2098.valid.m1 Manihot esculenta cassava2098.valid.m1 I
cassava42313.valid.m1 Manihot esculenta cassava42313.valid.m1 I
Ca_21186 Cicer arietinum Ca_21186 I
chr3.CM0590.390.nd Lotus japonicus chr3.CM0590.390.nd I
Ciclev10008812m.g Citrus clementina Ciclev10008812m.g I
Cla011949 Citrullus lanatus Cla011949 I
Cla023770 Citrullus lanatus Cla023770 I
Cucsa.074610 Cucumis sativus Cucsa.074610 I
Cucsa.341800 Cucumis sativus Cucsa.341800 I
Eucgr.F01093 Eucalyptus grandis Eucgr.F01093 I
evm.TU.supercontig_80.93 Carica papaya evm.TU.supercontig_80.93 I
ANAC019 Arabidopsis lyrata fgenesh2_kg.1__4367__AT1G52890.1 I
ATNAC3 Arabidopsis lyrata fgenesh2_kg.3__1697__AT3G15500.1 I
RD26 Arabidopsis lyrata fgenesh2_kg.7__1491__AT4G27410.3 I
gene31149-v1.0-hybrid Fragaria vesca gene31149-v1.0-hybrid I
GLYMA06G38410 Glycine max GLYMA06G38410 I
GLYMA12G22880 Glycine max GLYMA12G22880 I
GLYMA12G35000 Glycine max GLYMA12G35000 I
GLYMA13G35550 Glycine max GLYMA13G35550 I
Gorai.002G073700 Gossypium raimondii Gorai.002G073700 I
Gorai.009G433200 Gossypium raimondii Gorai.009G433200 I
LjSGA_036303.1 Lotus japonicus LjSGA_036303.1 I
MDP0000132623 Malus domestica MDP0000132623 I
MDP0000262032 Malus domestica MDP0000262032 I
mgf001766m Mimulus guttatus mgf001766m I
MTR_2g079990 Medicago truncatula MTR_2g079990 I
MTR_8g059170 Medicago truncatula MTR_8g059170 I
orange1.1g019011m.g Citrus sinensis orange1.1g019011m.g I
PGSC0003DMG400015342 Solanum tuberosum PGSC0003DMG400015342 I
PGSC0003DMG400019294 Solanum tuberosum PGSC0003DMG400019294 I
PK20135.1 Cannabis sativa PK20135.1 I
Pm011603 Prunus mume Pm011603 I
POPTR_0001s41460 Populus trichocarpa POPTR_0001s41460 I
POPTR_0011s12400 Populus trichocarpa POPTR_0011s12400 I
POPTR_1659s00200 Populus trichocarpa POPTR_1659s00200 I
PRUPE_ppa008301mg Prunus persica PRUPE_ppa008301mg I
SapurV1A.0127s0020 Salix purpurea SapurV1A.0127s0020 I
SapurV1A.0864s0080 Salix purpurea SapurV1A.0864s0080 I
SapurV1A.1471s0010 Salix purpurea SapurV1A.1471s0010 I
Solyc07g063410.2 Solanum lycopersicum Solyc07g063410.2 I
Solyc12g013620.1 Solanum lycopersicum Solyc12g013620.1 I
TCM_031364 Theobroma cacao TCM_031364 I
Thhalv10011676m.g Eutrema salsugineum Thhalv10011676m.g I
Thhalv10021174m.g Eutrema salsugineum Thhalv10021174m.g I
Thhalv10025818m.g Eutrema salsugineum Thhalv10025818m.g I