Pm024326 (Prunus mume)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pm024326 T283600_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB55
M00876_2.00 		Arabidopsis thaliana
ACCWAMCD
HGKTWGGT		 PBM
Franco-Zorrilla et al.(2014)
MYB55 		0.789 0.860
MYB55
M07102_2.00 		Arabidopsis thaliana
HNNNHBYAMCWAMCD
HGKTWGKTRVDNNND		 Dap-seq
OMalley et al.(2016)
MYB55_colamp_a 		0.789 0.860
MYB55
M07103_2.00 		Arabidopsis thaliana
NYNYAMCHACCRHH
DDYGGTDGKTRNRN		 Dap-seq
OMalley et al.(2016)
MYB55_col 		0.789 0.860
MYB61
M07002_2.00 		Arabidopsis thaliana
HNYAMCHACCDNHNH
DNDNHGGTDGKTRND		 Dap-seq
OMalley et al.(2016)
MYB61_col_a 		0.730 0.796
MYB61
M07003_2.00 		Arabidopsis thaliana
NHNYACCWAMCDH
DHGKTWGGTRNDN		 Dap-seq
OMalley et al.(2016)
MYB61_colamp_a 		0.730 0.796
MYB83
M01073_2.00 		Arabidopsis thaliana
YACCHACC
GGTDGGTR		 PBM
Sullivan et al.(2014)
pTH7140 		0.708 0.742
MYB83
M07066_2.00 		Arabidopsis thaliana
YCACCAACHNH
DNDGTTGGTGR		 Dap-seq
OMalley et al.(2016)
MYB83_col_a 		0.708 0.742
MYB83
M07067_2.00 		Arabidopsis thaliana
NCACCWAMCDNHNNN
NNNDNHGKTWGGTGN		 Dap-seq
OMalley et al.(2016)
MYB83_colamp_a 		0.708 0.742
MYB46
M00877_2.00 		Arabidopsis thaliana
NAMCNDHHN
NDDHNGKTN		 PBM
Franco-Zorrilla et al.(2014)
MYB46 		0.684 0.774
MYB46
M11046_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB46_Q6 		0.684 0.774
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm024326 Myb 14 61
Pm024326 Myb 67 112

Links

Other Myb/SANT family TFs
Other Prunus mume TFs

654 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29844.m003312 Ricinus communis 29844.m003312 N
30076.m004456 Ricinus communis 30076.m004456 N
AMTR_s00089p00043950 Amborella trichopoda AMTR_s00089p00043950 N
MUTE Arabidopsis thaliana AT3G06120 N
BGIOSGA012015 Oryza indica BGIOSGA012015 N
BGIOSGA020491 Oryza indica BGIOSGA020491 N
Bo3g060420 Brassica oleracea Bo3g060420 N
Bostr.2570s0048 Boechera stricta Bostr.2570s0048 N
Bra001183 Brassica rapa Bra001183 N
BRADI1G18400 Brachypodium distachyon BRADI1G18400 N
BRADI1G71990 Brachypodium distachyon BRADI1G71990 N
BRADI2G22810 Brachypodium distachyon BRADI2G22810 N
BRADI3G38510 Brachypodium distachyon BRADI3G38510 N
BRADI3G58360 Brachypodium distachyon BRADI3G58360 N
Cagra.1772s0035 Capsella grandiflora Cagra.1772s0035 N
Carubv10012751m.g Capsella rubella Carubv10012751m.g N
cassava29786.valid.m1 Manihot esculenta cassava29786.valid.m1 N
cassava3377.m1 Manihot esculenta cassava3377.m1 N
cassava39415.m1 Manihot esculenta cassava39415.m1 N
Ca_00615 Cicer arietinum Ca_00615 N
Ca_22410 Cicer arietinum Ca_22410 N
chr3.CM0208.290.nc Lotus japonicus chr3.CM0208.290.nc N
chr6.CM0139.250.nd Lotus japonicus chr6.CM0139.250.nd N
Ciclev10005947m.g Citrus clementina Ciclev10005947m.g N
Ciclev10020360m.g Citrus clementina Ciclev10020360m.g N
Cucsa.254010 Cucumis sativus Cucsa.254010 N
Eucgr.H02788 Eucalyptus grandis Eucgr.H02788 N
Eucgr.H03591 Eucalyptus grandis Eucgr.H03591 N
evm.TU.supercontig_3.51 Carica papaya evm.TU.supercontig_3.51 N
evm.TU.supercontig_57.85 Carica papaya evm.TU.supercontig_57.85 N
F775_02125 Aegilops tauschii F775_02125 N
F775_03517 Aegilops tauschii F775_03517 N
gene18608-v1.0-hybrid Fragaria vesca gene18608-v1.0-hybrid N
GLYMA07G05500 Glycine max GLYMA07G05500 N
GLYMA13G27880 Glycine max GLYMA13G27880 N
GLYMA15G11130 Glycine max GLYMA15G11130 N
GLYMA16G02020 Glycine max GLYMA16G02020 N
Gorai.003G041800 Gossypium raimondii Gorai.003G041800 N
Gorai.006G054300 Gossypium raimondii Gorai.006G054300 N
Gorai.007G113200 Gossypium raimondii Gorai.007G113200 N
Gorai.007G113300 Gossypium raimondii Gorai.007G113300 N
GRMZM2G417164 Zea mays GRMZM2G417164 N
GSMUA_Achr10G30300_001 Musa acuminata GSMUA_Achr10G30300_001 N
GSMUA_Achr5G06780_001 Musa acuminata GSMUA_Achr5G06780_001 N
GSMUA_Achr5G17900_001 Musa acuminata GSMUA_Achr5G17900_001 N
GSMUA_Achr6G10290_001 Musa acuminata GSMUA_Achr6G10290_001 N
GSMUA_Achr7G12790_001 Musa acuminata GSMUA_Achr7G12790_001 N
GSMUA_Achr7G21110_001 Musa acuminata GSMUA_Achr7G21110_001 N
GSMUA_Achr7G21190_001 Musa acuminata GSMUA_Achr7G21190_001 N
LPERR02G27220 Leersia perrieri LPERR02G27220 N
LPERR03G05820 Leersia perrieri LPERR03G05820 N
LPERR05G23220 Leersia perrieri LPERR05G23220 N
LPERR05G23890 Leersia perrieri LPERR05G23890 N
LPERR10G05620 Leersia perrieri LPERR10G05620 N
MDP0000131133 Malus domestica MDP0000131133 N
MDP0000229007 Malus domestica MDP0000229007 N
MDP0000321049 Malus domestica MDP0000321049 N
MDP0000829998 Malus domestica MDP0000829998 N
MLOC_57631 Hordeum vulgare MLOC_57631 N
MLOC_60291 Hordeum vulgare MLOC_60291 N
MLOC_67417 Hordeum vulgare MLOC_67417 N
MTR_2g022280 Medicago truncatula MTR_2g022280 N
MTR_8g024210 Medicago truncatula MTR_8g024210 N
OB05G35750 Oryza brachyantha OB05G35750 N
OBART03G06470 Oryza barthii OBART03G06470 N
OBART05G28280 Oryza barthii OBART05G28280 N
OGLUM03G06480 Oryza glumaepatula OGLUM03G06480 N
OLONG_001045 Oryza longistaminata OLONG_001045 N
OLONG_006958 Oryza longistaminata OLONG_006958 N
OMERI03G06350 Oryza meridionalis OMERI03G06350 N
ONIVA02G06380 Oryza nivara ONIVA02G06380 N
ONIVA05G30250 Oryza nivara ONIVA05G30250 N
OPUNC05G25820 Oryza punctata OPUNC05G25820 N
orange1.1g013752m.g Citrus sinensis orange1.1g013752m.g N
ORGLA03G0062600 Oryza glaberrima ORGLA03G0062600 N
ORGLA05G0246000 Oryza glaberrima ORGLA05G0246000 N
ORUFI03G06370 Oryza rufipogon ORUFI03G06370 N
ORUFI05G30290 Oryza rufipogon ORUFI05G30290 N
OS03G0188400 Oryza sativa OS03G0188400 N
OS05G0597000 Oryza sativa OS05G0597000 N
Pavir.Ea00071 Panicum virgatum Pavir.Ea00071 N
Pavir.Fb01393 Panicum virgatum Pavir.Fb01393 N
Pavir.J25730 Panicum virgatum Pavir.J25730 N
PGSC0003DMG400009101 Solanum tuberosum PGSC0003DMG400009101 N
PGSC0003DMG400016145 Solanum tuberosum PGSC0003DMG400016145 N
PK21055.1 Cannabis sativa PK21055.1 N
Pm002111 Prunus mume Pm002111 N
Pm019784 Prunus mume Pm019784 N
Pm028748 Prunus mume Pm028748 N
POPTR_0008s20720 Populus trichocarpa POPTR_0008s20720 N
PRUPE_ppa006041mg Prunus persica PRUPE_ppa006041mg N
PRUPE_ppa015055mg Prunus persica PRUPE_ppa015055mg N
PRUPE_ppa020862mg Prunus persica PRUPE_ppa020862mg N
SapurV1A.0022s0230 Salix purpurea SapurV1A.0022s0230 N
Sb09g030930 Sorghum bicolor Sb09g030930 N
MUTE Arabidopsis lyrata scaffold_300691.1 N
SELMODRAFT_410402 Selaginella moellendorffii SELMODRAFT_410402 N
SELMODRAFT_451148 Selaginella moellendorffii SELMODRAFT_451148 N
Si004438m.g Setaria italica Si004438m.g N
Si013925m.g Setaria italica Si013925m.g N
Solyc11g010340.1 Solanum lycopersicum Solyc11g010340.1 N
TCM_001031 Theobroma cacao TCM_001031 N
TCM_005028 Theobroma cacao TCM_005028 N
TCM_020520 Theobroma cacao TCM_020520 N
Thhalv10022251m.g Eutrema salsugineum Thhalv10022251m.g N
Traes_2BS_EE97B0B15 Triticum aestivum Traes_2BS_EE97B0B15 N
TRIUR3_09788 Triticum urartu TRIUR3_09788 N
MUTE Vitis vinifera VIT_05s0020g02700 N
VIT_07s0191g00240 Vitis vinifera VIT_07s0191g00240 N
VIT_15s0048g02510 Vitis vinifera VIT_15s0048g02510 N