Pm027272 (Prunus mume)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Pm027272 T283635_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAX3
M02700_2.00 		Arabidopsis thaliana
SCACCTACCHCCN
NGGDGGTAGGTGS		 SELEX
Mathelier et al.(2014)
MA0576.1 		0.722 0.759
RAX3
M11043_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB84_01 		0.722 0.759
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm027272 Myb 14 62
Pm027272 Myb 68 107

Links

Other Myb/SANT family TFs
Other Prunus mume TFs

155 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RAX3 Arabidopsis lyrata Al_scaffold_0005_1808 I 0.692
AMTR_s00056p00204920 Amborella trichopoda AMTR_s00056p00204920 I 0.715
Aquca_001_00195 Aquilegia coerulea Aquca_001_00195 I 0.687
RAX3 Arabidopsis thaliana AT3G49690 D 0.722
ATMYB68 Arabidopsis thaliana AT5G65790 I 0.722
BGIOSGA029715 Oryza indica BGIOSGA029715 I 0.674
Bo2g168190 Brassica oleracea Bo2g168190 I 0.692
Bo3g097710 Brassica oleracea Bo3g097710 I 0.722
Bo8g078940 Brassica oleracea Bo8g078940 I 0.692
Bo9g018910 Brassica oleracea Bo9g018910 I 0.713
Bostr.0568s0206 Boechera stricta Bostr.0568s0206 I 0.722
Bostr.6864s0273 Boechera stricta Bostr.6864s0273 I 0.666
Bra011785 Brassica rapa Bra011785 I 0.666
Bra017963 Brassica rapa Bra017963 I 0.683
Bra024419 Brassica rapa Bra024419 I 0.722
Bra031847 Brassica rapa Bra031847 I 0.692
Bra037828 Brassica rapa Bra037828 I 0.689
BRADI1G07260 Brachypodium distachyon BRADI1G07260 I 0.674
Cagra.0917s0007 Capsella grandiflora Cagra.0917s0007 I 0.722
Cagra.1838s0012 Capsella grandiflora Cagra.1838s0012 I 0.692
Carubv10018748m.g Capsella rubella Carubv10018748m.g I 0.692
Carubv10027655m.g Capsella rubella Carubv10027655m.g I 0.722
cassava11642.m1 Manihot esculenta cassava11642.m1 I 0.716
cassava16944.m1 Manihot esculenta cassava16944.m1 I 0.705
cassava22399.valid.m1 Manihot esculenta cassava22399.valid.m1 I 0.662
cassava25562.m1 Manihot esculenta cassava25562.m1 I 0.662
cassava26004.m1 Manihot esculenta cassava26004.m1 I 0.662
Ca_03266 Cicer arietinum Ca_03266 I 0.686
Ca_09203 Cicer arietinum Ca_09203 I 0.662
chr2.CM0021.150.nc Lotus japonicus chr2.CM0021.150.nc I 0.673
Ciclev10010364m.g Citrus clementina Ciclev10010364m.g I 0.662
Ciclev10010621m.g Citrus clementina Ciclev10010621m.g I 0.682
Ciclev10027178m.g Citrus clementina Ciclev10027178m.g I 0.662
Cla014272 Citrullus lanatus Cla014272 I 0.662
Cla018072 Citrullus lanatus Cla018072 I 0.676
Cla019089 Citrullus lanatus Cla019089 I 0.662
Cucsa.092250 Cucumis sativus Cucsa.092250 I 0.662
Cucsa.103470 Cucumis sativus Cucsa.103470 I 0.662
Cucsa.288590 Cucumis sativus Cucsa.288590 I 0.708
Cucsa.306690 Cucumis sativus Cucsa.306690 I 0.676
Eucgr.C00190 Eucalyptus grandis Eucgr.C00190 I 0.686
Eucgr.C00624 Eucalyptus grandis Eucgr.C00624 I 0.726
Eucgr.C02280 Eucalyptus grandis Eucgr.C02280 I 0.689
Eucgr.C02391 Eucalyptus grandis Eucgr.C02391 I 0.689
Eucgr.C03699 Eucalyptus grandis Eucgr.C03699 I 0.714
Eucgr.F02207 Eucalyptus grandis Eucgr.F02207 I 0.686
evm.TU.supercontig_129.59 Carica papaya evm.TU.supercontig_129.59 I 0.662
evm.TU.supercontig_95.69 Carica papaya evm.TU.supercontig_95.69 I 0.662
ATMYB68 Arabidopsis lyrata fgenesh2_kg.8__2632__AT5G65790.1 I 0.722
gene02643-v1.0-hybrid Fragaria vesca gene02643-v1.0-hybrid I 0.697
gene05581-v1.0-hybrid Fragaria vesca gene05581-v1.0-hybrid I 0.662
gene27379-v1.0-hybrid Fragaria vesca gene27379-v1.0-hybrid I 0.686
GLYMA0041S00310 Glycine max GLYMA0041S00310 I 0.662
GLYMA01G00805 Glycine max GLYMA01G00805 I 0.746
GLYMA01G40411 Glycine max GLYMA01G40411 I 0.665
GLYMA04G05170 Glycine max GLYMA04G05170 I 0.662
GLYMA05G23080 Glycine max GLYMA05G23080 I 0.700
GLYMA05G36120 Glycine max GLYMA05G36120 I 0.750
GLYMA06G05260 Glycine max GLYMA06G05260 I 0.671
GLYMA07G15250 Glycine max GLYMA07G15250 I 0.725
GLYMA11G04880 Glycine max GLYMA11G04880 I 0.662
GLYMA13G01200 Glycine max GLYMA13G01200 I 0.662
GLYMA13G04920 Glycine max GLYMA13G04920 I 0.662
GLYMA14G10483 Glycine max GLYMA14G10483 I 0.707
GLYMA17G07330 Glycine max GLYMA17G07330 I 0.686
GLYMA17G16980 Glycine max GLYMA17G16980 I 0.715
GLYMA17G35020 Glycine max GLYMA17G35020 I 0.707
GLYMA19G02090 Glycine max GLYMA19G02090 I 0.662
Gorai.001G010000 Gossypium raimondii Gorai.001G010000 I 0.720
Gorai.001G024300 Gossypium raimondii Gorai.001G024300 I 0.716
Gorai.004G231100 Gossypium raimondii Gorai.004G231100 I 0.665
Gorai.008G086400 Gossypium raimondii Gorai.008G086400 I 0.665
Gorai.009G006700 Gossypium raimondii Gorai.009G006700 I 0.665
Gorai.009G222900 Gossypium raimondii Gorai.009G222900 I 0.662
Gorai.010G079900 Gossypium raimondii Gorai.010G079900 I 0.694
GRMZM2G006352 Zea mays GRMZM2G006352 I 0.706
GSMUA_Achr4G01050_001 Musa acuminata GSMUA_Achr4G01050_001 I 0.673
GSMUA_Achr4G28090_001 Musa acuminata GSMUA_Achr4G28090_001 I 0.663
GSMUA_Achr5G09280_001 Musa acuminata GSMUA_Achr5G09280_001 I 0.676
GSMUA_Achr6G30830_001 Musa acuminata GSMUA_Achr6G30830_001 I 0.669
GSMUA_Achr6G31740_001 Musa acuminata GSMUA_Achr6G31740_001 I 0.663
GSMUA_Achr8G24780_001 Musa acuminata GSMUA_Achr8G24780_001 I 0.677
GSMUA_Achr9G09790_001 Musa acuminata GSMUA_Achr9G09790_001 I 0.678
LjSGA_033877.1 Lotus japonicus LjSGA_033877.1 I 0.662
LjSGA_044047.1 Lotus japonicus LjSGA_044047.1 I 0.662
LPERR01G22970 Leersia perrieri LPERR01G22970 I 0.673
LPERR09G07880 Leersia perrieri LPERR09G07880 I 0.674
Lus10001316.g Linum usitatissimum Lus10001316.g I 0.662
Lus10006978.g Linum usitatissimum Lus10006978.g I 0.662
Lus10007248.g Linum usitatissimum Lus10007248.g I 0.686
Lus10028248.g Linum usitatissimum Lus10028248.g I 0.686
MDP0000124992 Malus domestica MDP0000124992 I 0.673
MDP0000262514 Malus domestica MDP0000262514 I 0.673
MDP0000322479 Malus domestica MDP0000322479 I 0.686
MDP0000785820 Malus domestica MDP0000785820 I 0.754
MDP0000786507 Malus domestica MDP0000786507 I 0.673
MDP0000809452 Malus domestica MDP0000809452 I 0.662
MDP0000836365 Malus domestica MDP0000836365 I 0.754
mgf002711m Mimulus guttatus mgf002711m I 0.734
mgf011646m Mimulus guttatus mgf011646m I 0.685
mgf020328m Mimulus guttatus mgf020328m I 0.662
mgf021409m Mimulus guttatus mgf021409m I 0.748
mgf024894m Mimulus guttatus mgf024894m I 0.662
MTR_1g017000 Medicago truncatula MTR_1g017000 I 0.698
MTR_1g017140 Medicago truncatula MTR_1g017140 I 0.662
MTR_3g103570 Medicago truncatula MTR_3g103570 I 0.695
MTR_4g097570 Medicago truncatula MTR_4g097570 I 0.661
MTR_4g128670 Medicago truncatula MTR_4g128670 I 0.686
O49746_ARATH Arabidopsis thaliana O49746_ARATH I 0.722
OB01G36020 Oryza brachyantha OB01G36020 I 0.673
OB05G32650 Oryza brachyantha OB05G32650 I 0.668
OMERI09G08730 Oryza meridionalis OMERI09G08730 I 0.671
OPUNC03G32690 Oryza punctata OPUNC03G32690 I 0.674
OPUNC09G09680 Oryza punctata OPUNC09G09680 I 0.674
orange1.1g017727m.g Citrus sinensis orange1.1g017727m.g I 0.662
orange1.1g036344m.g Citrus sinensis orange1.1g036344m.g I 0.662
orange1.1g045583m.g Citrus sinensis orange1.1g045583m.g I 0.682
ORGLA09G0083700 Oryza glaberrima ORGLA09G0083700 I 0.671
ORUFI09G12010 Oryza rufipogon ORUFI09G12010 I 0.674
Pavir.Bb01783 Panicum virgatum Pavir.Bb01783 I 0.663
Pavir.J34453 Panicum virgatum Pavir.J34453 I 0.706
PGSC0003DMG400000349 Solanum tuberosum PGSC0003DMG400000349 I 0.682
PGSC0003DMG400004948 Solanum tuberosum PGSC0003DMG400004948 I 0.667
PGSC0003DMG400018750 Solanum tuberosum PGSC0003DMG400018750 I 0.686
PK02305.1 Cannabis sativa PK02305.1 I 0.686
PK05741.1 Cannabis sativa PK05741.1 I 0.675
PK14382.1 Cannabis sativa PK14382.1 I 0.724
PK26008.1 Cannabis sativa PK26008.1 I 0.671
Pm002200 Prunus mume Pm002200 I 0.695
Pm008668 Prunus mume Pm008668 I 0.662
POPTR_0002s11440 Populus trichocarpa POPTR_0002s11440 I 0.662
POPTR_0006s18620 Populus trichocarpa POPTR_0006s18620 I 0.673
POPTR_0006s25060 Populus trichocarpa POPTR_0006s25060 I 0.726
POPTR_0007s14630 Populus trichocarpa POPTR_0007s14630 I 0.662
POPTR_0018s10390 Populus trichocarpa POPTR_0018s10390 I 0.662
PRUPE_ppa019554mg Prunus persica PRUPE_ppa019554mg I 0.677
PRUPE_ppa022431mg Prunus persica PRUPE_ppa022431mg I 0.686
PRUPE_ppa023431mg Prunus persica PRUPE_ppa023431mg I 0.662
PRUPE_ppa024417mg Prunus persica PRUPE_ppa024417mg I 0.682
PRUPE_ppa026975mg Prunus persica PRUPE_ppa026975mg I 0.840
SapurV1A.0004s0360 Salix purpurea SapurV1A.0004s0360 I 0.662
SapurV1A.0271s0250 Salix purpurea SapurV1A.0271s0250 I 0.662
SapurV1A.0818s0020 Salix purpurea SapurV1A.0818s0020 I 0.683
SapurV1A.0890s0050 Salix purpurea SapurV1A.0890s0050 I 0.726
SapurV1A.3377s0010 Salix purpurea SapurV1A.3377s0010 I 0.726
Si002350m.g Setaria italica Si002350m.g I 0.706
Solyc04g077260.2 Solanum lycopersicum Solyc04g077260.2 I 0.667
Solyc07g006750.2 Solanum lycopersicum Solyc07g006750.2 I 0.686
Solyc12g008670.1 Solanum lycopersicum Solyc12g008670.1 I 0.661
TCM_037245 Theobroma cacao TCM_037245 I 0.716
TCM_038898 Theobroma cacao TCM_038898 I 0.665
Thhalv10005299m.g Eutrema salsugineum Thhalv10005299m.g I 0.722
Thhalv10010576m.g Eutrema salsugineum Thhalv10010576m.g I 0.671
VIT_00s1352g00010 Vitis vinifera VIT_00s1352g00010 I 0.662
VIT_18s0001g08470 Vitis vinifera VIT_18s0001g08470 I 0.662