CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Q9FR42_TOBAC *(Nicotiana tabacum)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00249 (Myb_DNA-binding)	IPR014778	Q9FR42_TOBAC	T283699_2.00	HughesLab (2013-Jun-13)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Q9FR42_TOBAC M11076_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MYBAS1_01	(Direct)	(Direct)
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
myb.Ph3 M02704_2.00	Petunia x hybrida	WAACNGTYW	WRACNGTTW	SELEX Mathelier et al.(2014) MA0054.1	0.875	0.925
myb.Ph3 M11070_2.00	Petunia x hybrida	RTAACSGTTTYHW	WDRAAACSGTTAY	Transfac Matys et al.(2006) P$MYBPH3_01	0.875	0.925
myb.Ph3 M11071_2.00	Petunia x hybrida	STAACTAACTHHH	DDDAGTTAGTTAS	Transfac Matys et al.(2006) P$MYBPH3_02	0.875	0.925
MYB101 M07051_2.00	Arabidopsis thaliana	NWHHNWAACCGWWHH	DDWWCGGTTWNDDWN	Dap-seq OMalley et al.(2016) MYB101_col_a	0.815	0.828
MYB101 M07052_2.00	Arabidopsis thaliana	DHHHVTAACYGWHWN	NWDWCRGTTABDDDH	Dap-seq OMalley et al.(2016) MYB101_colamp_a	0.815	0.828
Gam1 M02703_2.00	Hordeum vulgare	NVYAACSGMC	GKCSGTTRBN	SELEX Mathelier et al.(2014) MA0034.1	0.806	0.806
Gam1 M11061_2.00	Hordeum vulgare	YAACSRHM	KDYSGTTR	Transfac Matys et al.(2006) P$GAMYB_01	0.806	0.806
GAM1_ORYSI M11055_2.00	Oryza sativa	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$GAMYB_Q2	0.806	0.806
MYB33 M02306_2.00	Arabidopsis thaliana	HAACNRHHNN	NNDDYNGTTD	PBM Weirauch et al.(2014) pTH8204	0.754	0.774
MYB33 M07120_2.00	Arabidopsis thaliana	NTAACYGWHWH	DWDWCRGTTAN	Dap-seq OMalley et al.(2016) MYB33_col_a	0.754	0.774
ATMYB65 M01076_2.00	Arabidopsis thaliana	HAACNRHHN	NDDYNGTTD	PBM Sullivan et al.(2014) pTH7084	0.737	0.785
ATMYB65 M07076_2.00	Arabidopsis thaliana	DHHNTAACBGHMW	WKDCVGTTANDDH	Dap-seq OMalley et al.(2016) MYB65_col200_a	0.737	0.785
ATMYB65 M07077_2.00	Arabidopsis thaliana	NTAACYGHMWHNDHN	NDHNDWKDCRGTTAN	Dap-seq OMalley et al.(2016) MYB65_colamp_a	0.737	0.785
AtMYB81 M07049_2.00	Arabidopsis thaliana	VTAACNGHWWH	DWWDCNGTTAB	Dap-seq OMalley et al.(2016) MYB81_col_a	0.682	0.742
AtMYB81 M07050_2.00	Arabidopsis thaliana	DHHNYAACBGHWWH	DWWDCVGTTRNDDH	Dap-seq OMalley et al.(2016) MYB81_colamp_a	0.682	0.742
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Q9FR42_TOBAC	Myb	22	69	KGPWTATEDAILMEYVKKNGEGNWNAVQRNSGLMRCGKSCRLRWANHL
Q9FR42_TOBAC	Myb	75	120	KGAFSLEEERIIVELHAKLGNKWARMAAQMPGRTDNEIKNYWNTRL

Links
Other Myb/SANT family TFs
Other *Nicotiana tabacum* TFs

239 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
GLYMA10G01330	Glycine max	GLYMA10G01330	I

Q9FR42_TOBAC (Nicotiana tabacum) Myb/SANT

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

239 Related TFs

Q9FR42_TOBAC **(Nicotiana tabacum)
Myb/SANT**