cassava9078.m1 (Manihot esculenta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 cassava9078.m1 T284341_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q948S5_TOBAC
M11074_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MYBA2_01 		0.689 0.937
MYB_AVIMB
M11068_2.00 		Avian myeloblastosis virus
VRYAACKGNH
DNCMGTTRYB		 Transfac
Matys et al.(2006)
V$VMYB_01 		0.685 0.694
MYB_AVIMB
M11069_2.00 		Avian myeloblastosis virus
BVYAACGGH
DCCGTTRBV		 Transfac
Matys et al.(2006)
V$VMYB_02 		0.685 0.694
PC-MYB1
M07110_2.00 		Arabidopsis thaliana
NDWWNTDRCCGTTRN
NYAACGGYHANWWHN		 Dap-seq
OMalley et al.(2016)
MYB3R1_col_a 		0.671 0.892
PC-MYB1
M07111_2.00 		Arabidopsis thaliana
DWHNTDRCCGTTR
YAACGGYHANDWH		 Dap-seq
OMalley et al.(2016)
MYB3R1_colamp_a 		0.671 0.892
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava9078.m1 Myb 1 19
cassava9078.m1 Myb 25 71
cassava9078.m1 Myb 77 121

Links

Other Myb/SANT family TFs
Other Manihot esculenta TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cmyd_10015684 Chelonia mydas Cmyd_10015684 N
ENSAMEG00000018899 Ailuropoda melanoleuca ENSAMEG00000018899 N
ZBED2 Bos taurus ENSBTAG00000046637 N
ENSCHOG00000003372 Choloepus hoffmanni ENSCHOG00000003372 N
ZBED2 Choloepus hoffmanni ENSCHOG00000009685 N
ZBED3 Callithrix jacchus ENSCJAG00000019950 N
ZBED2 Callithrix jacchus ENSCJAG00000020209 N
ENSCSAG00000018719 Chlorocebus sabaeus ENSCSAG00000018719 N
ENSCSAG00000019417 Chlorocebus sabaeus ENSCSAG00000019417 N
ZBED2 Dasypus novemcinctus ENSDNOG00000013027 N
ZBED3 Dasypus novemcinctus ENSDNOG00000041041 N
ZBED2 Equus caballus ENSECAG00000001371 N
ZBED2 Homo sapiens ENSG00000177494 N
ZBED2 Gorilla gorilla ENSGGOG00000010755 N
ENSMEUG00000007529 Macropus eugenii ENSMEUG00000007529 N
ZBED2 Myotis lucifugus ENSMLUG00000024352 N
ZBED3 Macaca mulatta ENSMMUG00000021357 N
ENSMMUG00000032061 Macaca mulatta ENSMMUG00000032061 N
ZBED2 Monodelphis domestica ENSMODG00000025309 N
ENSMPUG00000018931 Mustela putorius furo ENSMPUG00000018931 N
ENSNLEG00000004079 Nomascus leucogenys ENSNLEG00000004079 N
ENSOANG00000015761 Ornithorhynchus anatinus ENSOANG00000015761 N
ENSOARG00000001810 Ovis aries ENSOARG00000001810 N
ZBED2 Oryctolagus cuniculus ENSOCUG00000029023 N
ZBED2 Otolemur garnettii ENSOGAG00000034292 N
ENSP00000321370 Macaca fascicularis ENSP00000321370 N
ENSP00000321370-D1 Bos grunniens ENSP00000321370-D1 N
ENSPANG00000001756 Papio anubis ENSPANG00000001756 N
ENSPANG00000009749 Papio anubis ENSPANG00000009749 N
ENSPPYG00000013560 Pongo abelii ENSPPYG00000013560 N
ZBED2 Pan troglodytes ENSPTRG00000015206 N
ZBED2 Pteropus vampyrus ENSPVAG00000002199 N
ZBED2 Sorex araneus ENSSARG00000010422 N
ZBED2 Sus scrofa ENSSSCG00000011936 N
ZBED3 Sus scrofa ENSSSCG00000014095 N
ENSTSYG00000000791 Tarsius syrichta ENSTSYG00000000791 N
ZBED2 Vicugna pacos ENSVPAG00000000425 N
Myotis_brandtii_ZBED2_10003001 Myotis brandtii Myotis_brandtii_ZBED2_10003001 N