Cucsa.291780 (Cucumis sativus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cucsa.291780 T284500_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CDC5
M02698_2.00 		Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN		 SELEX
Mathelier et al.(2014)
MA0579.1 		0.909 0.989
CDC5
M11037_2.00 		Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN		 Transfac
Matys et al.(2006)
P$CDC5_01 		0.909 0.989
CDC5L
M11049_2.00 		Homo sapiens
GWKTTAAYRTAD
HTAYRTTAAMWC		 Transfac
Matys et al.(2006)
V$CDC5_01 		0.814 0.880
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.291780.1 Myb 7 53
Cucsa.291780.1 Myb 59 103

Links

Other Myb/SANT family TFs
Other Cucumis sativus TFs

574 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CG10274 Drosophila melanogaster FBgn0035690 N
GA10210 Drosophila pseudoobscura FBgn0070269 N
GF10913 Drosophila ananassae FBgn0087953 N
GG14073 Drosophila erecta FBgn0106335 N
GH16297 Drosophila grimshawi FBgn0123768 N
GI13238 Drosophila mojavensis FBgn0135995 N
GL15564 Drosophila persimilis FBgn0153168 N
GM13856 Drosophila sechellia FBgn0168787 N
GJ12011 Drosophila virilis FBgn0199263 N
GK16909 Drosophila willistoni FBgn0218908 N
GE20498 Drosophila yakuba FBgn0237812 N