CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.C_scaffold_12000199
(
Cochliobolus heterostrophus C5
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
fgenesh1_pg.C_scaffold_12000199
T284870_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU01706
M02344_2.00
Neurospora crassa
NNNAWYNNNN
NNNNRWTNNN
PBM
Weirauch et al.(2014)
pTH9662
0.716
0.762
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.C_scaffold_12000199
Myb
89
133
QSKWTPEEDNLTIELRGQGMKWDDIAKRLPGRSSISCRLRYQNYL
fgenesh1_pg.C_scaffold_12000199
Myb
136
176
RAIWDEEKKNKLARLYARFKDQMWQKVATEMGIPWRSAESM
Links
Other
Myb/SANT
family TFs
Other
Cochliobolus heterostrophus C5
TFs
74 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB00295.1
Alternaria brassicicola
AB00295.1
N
0.000
COCC4DRAFT_128058
Bipolaris maydis
COCC4DRAFT_128058
N
0.000
COCCADRAFT_99591
Bipolaris zeicola
COCCADRAFT_99591
N
0.000
COCMIDRAFT_2302
Bipolaris oryzae
COCMIDRAFT_2302
N
0.000
COCSADRAFT_243580
Bipolaris sorokiniana
COCSADRAFT_243580
N
0.000
COCVIDRAFT_17516
Bipolaris victoriae
COCVIDRAFT_17516
N
0.000
estExt_Genewise1.C_11541
Cochliobolus heterostrophus C5
estExt_Genewise1.C_11541
N
0.000
LEMA_P079480.1
Leptosphaeria maculans
LEMA_P079480.1
N
0.000
PTRG_09921
Pyrenophora triticirepentis
PTRG_09921
N
0.000
PTT_01703
Pyrenophora teres
PTT_01703
N
0.000
SETTUDRAFT_103147
Setosphaeria turcica
SETTUDRAFT_103147
N
0.000
Z518_03482
Rhinocladiella mackenziei
Z518_03482
N
0.000