Bostr.26833s0846 (Boechera stricta)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Bostr.26833s0846 T285823_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB49
M07140_2.00 		Arabidopsis thaliana
HDBBYYACCWAMYWH
DWRKTWGGTRRVVHD		 Dap-seq
OMalley et al.(2016)
MYB49_col_a 		0.896 0.978
MYB49
M07141_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHN
NDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB49_colamp_a 		0.896 0.978
AtMYB41
M07109_2.00 		Arabidopsis thaliana
DHDBBYYACCTAMYW
WRKTAGGTRRVVHDH		 Dap-seq
OMalley et al.(2016)
MYB41_col_a 		0.719 0.817
PK28187.1
M01286_2.00 		Cannabis sativa
TACCTACC
GGTAGGTA		 PBM
Lambert et al.(2019)
pTH11305 		0.696 0.860
AtMYB74
M07104_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB74_colamp_a 		0.693 0.828
AtMYB74
M07105_2.00 		Arabidopsis thaliana
BYHYACCTAMYHHH
DDDRKTAGGTRDRV		 Dap-seq
OMalley et al.(2016)
MYB74_col 		0.693 0.828
MYB107
M07061_2.00 		Arabidopsis thaliana
NDDWDBBYYACCWAMYHH
DDRKTWGGTRRVVHWHHN		 Dap-seq
OMalley et al.(2016)
MYB107_col_a 		0.684 0.774
MYB107
M07062_2.00 		Arabidopsis thaliana
WNBYYYACCWAMYH
DRKTWGGTRRRVNW		 Dap-seq
OMalley et al.(2016)
MYB107_colamp_a 		0.684 0.774
MYB39
M07106_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_col_a 		0.680 0.742
MYB39
M07107_2.00 		Arabidopsis thaliana
NYYYACCWAMYWHHHHHHHNH
DNDDDDDDDWRKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_colamp_a 		0.680 0.742
MYB106
M11040_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G01140_01 		0.678 0.774
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.26833s0846.1.p Myb 14 61
Bostr.26833s0846.1.p Myb 67 112

Links

Other Myb/SANT family TFs
Other Boechera stricta TFs

373 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Bb01144 Panicum virgatum Pavir.Bb01144 N
Pavir.J20075 Panicum virgatum Pavir.J20075 N
SapurV1A.0344s0360 Salix purpurea SapurV1A.0344s0360 I
Sb08g014060 Sorghum bicolor Sb08g014060 I
Si019165m.g Setaria italica Si019165m.g N
Si020131m.g Setaria italica Si020131m.g N