Cagra.0381s0008 (Capsella grandiflora)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cagra.0381s0008 T285951_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GPRI1
M00874_2.00 		Arabidopsis thaliana
NNDATHN
NDATHNN		 PBM
Franco-Zorrilla et al.(2014)
GLK1 		0.791 0.894
APRR2
M02300_2.00 		Arabidopsis thaliana
NNRNWATCNN
NNGATWNYNN		 PBM
Weirauch et al.(2014)
pTH7102 		0.719 0.872
ARR1
M02297_2.00 		Arabidopsis thaliana
NAAGATHCKN
NMGDATCTTN		 PBM
Weirauch et al.(2014)
pTH8590 		0.672 0.723
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0381s0008.1.p Myb 159 209

Links

Other Myb/SANT family TFs
Other Capsella grandiflora TFs

157 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AEPI009874 Anopheles epiroticus AEPI009874 I
Afo_R010710 Aptenodytes forsteri Afo_R010710 I
Alligator_sinensis_CCG000956.1 Alligator sinensis Alligator_sinensis_CCG000956.1 I
ASIM_0001979401 Anisakis simplex ASIM_0001979401 I
CGOC_0000920101 Cylicostephanus goldi CGOC_0000920101 I
csin100106 Clonorchis sinensis csin100106 I
csin104013 Clonorchis sinensis csin104013 I
D917_09895 Trichinella nativa D917_09895 I
DICVIV_08502 Dictyocaulus viviparus DICVIV_08502 I
DICVIV_09496 Dictyocaulus viviparus DICVIV_09496 I
DILT_0000398401 Diphyllobothrium latum DILT_0000398401 I
DILT_0000438001 Diphyllobothrium latum DILT_0000438001 I
EmuJ_000770300 Echinococcus multilocularis EmuJ_000770300 I
ENSAPLG00000005437 Anas platyrhynchos ENSAPLG00000005437 I
ELF1 Choloepus hoffmanni ENSCHOG00000005821 I
ENSCING00000003158 Ciona intestinalis ENSCING00000003158 I
ENSCSAVG00000008567 Ciona savignyi ENSCSAVG00000008567 I
spi1b Danio rerio ENSDARG00000000767 I
SPDEF Danio rerio ENSDARG00000029930 N
spi1a Danio rerio ENSDARG00000067797 I
ETS1 Dasypus novemcinctus ENSDNOG00000045506 I
SPDEF Dasypus novemcinctus ENSDNOG00000047693 N
ENSECAG00000021269 Equus caballus ENSECAG00000021269 I
ENSEEUG00000010347 Erinaceus europaeus ENSEEUG00000010347 I
SPDEF Erinaceus europaeus ENSEEUG00000010400 N
ETV6 Echinops telfairi ENSETEG00000002501 I
ETS2 Felis catus ENSFCAG00000007489 I
ETV2 Homo sapiens ENSG00000105672 D
ENSGACG00000003298 Gasterosteus aculeatus ENSGACG00000003298 I
ENSGMOG00000003729 Gadus morhua ENSGMOG00000003729 I
ENSGMOG00000010043 Gadus morhua ENSGMOG00000010043 I
ENSGMOG00000019471 Gadus morhua ENSGMOG00000019471 I
ENSLOCG00000004449 Lepisosteus oculatus ENSLOCG00000004449 I
ENSMEUG00000000444 Macropus eugenii ENSMEUG00000000444 I
ENSMEUG00000003760 Macropus eugenii ENSMEUG00000003760 I
ENSMEUG00000003986 Macropus eugenii ENSMEUG00000003986 I
ENSMEUG00000006132 Macropus eugenii ENSMEUG00000006132 I
ETS1 Meleagris gallopavo ENSMGAG00000000967 I
ENSMGAG00000002725 Meleagris gallopavo ENSMGAG00000002725 I
ENSMGAG00000003467 Meleagris gallopavo ENSMGAG00000003467 I
ENSMGAG00000016365 Meleagris gallopavo ENSMGAG00000016365 I
GABPA Microcebus murinus ENSMICG00000006341 I
ETS2 Monodelphis domestica ENSMODG00000020979 I
Spic Mus musculus ENSMUSG00000004359 D
ENSOANG00000022349 Ornithorhynchus anatinus ENSOANG00000022349 I
GABPA Ochotona princeps ENSOPRG00000009283 I
ENSORLG00000007287 Oryzias latipes ENSORLG00000007287 I
ENSP00000227163 Macaca fascicularis ENSP00000227163 I
ELF5 Procavia capensis ENSPCAG00000005719 I
ETV6 Procavia capensis ENSPCAG00000016039 I
ERF Procavia capensis ENSPCAG00000016986 I
ENSPVAG00000010230 Pteropus vampyrus ENSPVAG00000010230 I
ETV2 Sorex araneus ENSSARG00000010742 N
ELK4 Sorex araneus ENSSARG00000014509 I
ENSSSCG00000003049 Sus scrofa ENSSSCG00000003049 I
ENSSSCG00000024457 Sus scrofa ENSSSCG00000024457 I
ENSTBEG00000017397 Tupaia belangeri ENSTBEG00000017397 I
ENSTNIG00000007898 Tetraodon nigroviridis ENSTNIG00000007898 N
ELF2 Tursiops truncatus ENSTTRG00000013559 I
ENSVPAG00000005650 Vicugna pacos ENSVPAG00000005650 I
GPUH_0002284801 Gongylonema pulchrum GPUH_0002284801 I
HCOI00329800 Haemonchus contortus HCOI00329800 I
HCOI01123400 Haemonchus contortus HCOI01123400 I
HDID_0000070301 Hymenolepis diminuta HDID_0000070301 I
HDID_0000502901 Hymenolepis diminuta HDID_0000502901 N
HelroG138329 Helobdella robusta HelroG138329 I
HelroG189408 Helobdella robusta HelroG189408 N
HelroG63872 Helobdella robusta HelroG63872 I
HelroG64381 Helobdella robusta HelroG64381 I
HelroG70650 Helobdella robusta HelroG70650 I
HelroG88618 Helobdella robusta HelroG88618 I
HMEL005115 Heliconius melpomene HMEL005115 N
HMEL013736 Heliconius melpomene HMEL013736 N
HPBE_0001740201 Heligmosomoides bakeri HPBE_0001740201 I
L893_g22986 Steinernema glaseri L893_g22986 N
L898_g23769 Steinernema monticolum L898_g23769 N
MCOS_0000169201 Mesocestoides corti MCOS_0000169201 N
MCOS_0000274301 Mesocestoides corti MCOS_0000274301 I
MESCA005353 Megaselia scalaris MESCA005353 I
MhA1_Contig140.frz3.gene1 Meloidogyne hapla MhA1_Contig140.frz3.gene1 I
NECAME_08455 Necator americanus NECAME_08455 I
NECAME_17353 Necator americanus NECAME_17353 I
NEMVEDRAFT_v1g81516 Nematostella vectensis NEMVEDRAFT_v1g81516 I
Ocbimv22009962m.g Octopus bimaculoides Ocbimv22009962m.g N
Ocbimv22017738m.g Octopus bimaculoides Ocbimv22017738m.g I
OESDEN_02390 Oesophagostomum dentatum OESDEN_02390 I
OESDEN_14003 Oesophagostomum dentatum OESDEN_14003 I
OFLC_0000896901 Onchocerca flexuosa OFLC_0000896901 I
PPA23378 Pristionchus pacificus PPA23378 I
PPAI006589 Phlebotomus papatasi PPAI006589 I
PXEA_0000391701 Protopolystoma xenopodis PXEA_0000391701 N
PXEA_0001691201 Protopolystoma xenopodis PXEA_0001691201 I
PXEA_0002160701 Protopolystoma xenopodis PXEA_0002160701 N
scaffold367-EXSNAP2012.2 Pristionchus exspectatus scaffold367-EXSNAP2012.2 N
scaffold700-EXSNAP2012.3 Pristionchus exspectatus scaffold700-EXSNAP2012.3 N
Sjc_0037140 Schistosoma japonicum Sjc_0037140 N
Sjc_0045590 Schistosoma japonicum Sjc_0045590 I
SMTD_0000204001 Schistosoma mattheei SMTD_0000204001 I
SMU15000711 Schmidtea mediterranea SMU15000711 I
SPER_0001231601 Spirometra erinaceieuropaei SPER_0001231601 N
SPER_0003658001 Spirometra erinaceieuropaei SPER_0003658001 N
SPER_0003941101 Spirometra erinaceieuropaei SPER_0003941101 I
SROB_0000200901 Schistosoma rodhaini SROB_0000200901 N
SVUK_0000082401 Strongylus vulgaris SVUK_0000082401 I
T265_00069 Opisthorchis viverrini T265_00069 N
T265_00304 Opisthorchis viverrini T265_00304 I
TASK_0000713401 Taenia asiatica TASK_0000713401 I
TASK_0000713501 Taenia asiatica TASK_0000713501 N
TELCIR_08433 Teladorsagia circumcincta TELCIR_08433 I
TRE_0001101301 Trichobilharzia regenti TRE_0001101301 I
TRE_0002163001 Trichobilharzia regenti TRE_0002163001 I
TsM_000675600 Taenia solium TsM_000675600 N
TsM_000835300 Taenia solium TsM_000835300 I
WUBG_12435 Wuchereria bancrofti WUBG_12435 I
XP_002153910.1 Hydra magnipapillata XP_002153910.1 I