Cagra.5249s0014 (Capsella grandiflora)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Cagra.5249s0014 T286163_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G04760
M02304_2.00 		Arabidopsis thaliana
NDGATAAGGN
NCCTTATCHN		 PBM
Weirauch et al.(2014)
pTH7079 		0.896 0.989
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.5249s0014.1.p Myb 3 51
Cagra.5249s0014.1.p Myb 97 144

Links

Other Myb/SANT family TFs
Other Capsella grandiflora TFs

29 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CLUG_01116 Candida lusitaniae CLUG_01116 N
CLUG_01116 Clavispora lusitaniae CLUG_01116 N
DEHA2F12760g Debaryomyces hansenii DEHA2F12760g N
fgenesh1_pg.C_chr_2.1000920 Pichia stipitis fgenesh1_pg.C_chr_2.1000920 N
GNLVRS01_PISO0I10656g Millerozyma farinosa GNLVRS01_PISO0I10656g N
GNLVRS01_PISO0J12461g Millerozyma farinosa GNLVRS01_PISO0J12461g N
KUCA_T00001191001 Kuraishia capsulata KUCA_T00001191001 N
PAS_chr3_0260 Komagataella pastoris PAS_chr3_0260 N
PGUG_00911 Candida guilliermondii PGUG_00911 N
PGUG_00911 Meyerozyma guilliermondii PGUG_00911 N
PICST_30244 Scheffersomyces stipitis PICST_30244 N
SPAPADRAFT_142226 Spathaspora passalidarum SPAPADRAFT_142226 N
XP_002492476.1 Pichia pastoris XP_002492476.1 N