CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10028160m.g
(
Capsella rubella
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Carubv10028160m.g
T286473_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10028160m
Myb
56
103
KGKWGKSEDMKLNQMVEQYDGIIKWASIAKNLKGRTGKQCRERWHNHL
Carubv10028160m
Myb
109
154
KTAWTKEEDQILVAVHKVVGTKWYSISQHLPGRTENNIKNRWNATK
Links
Other
Myb/SANT
family TFs
Other
Capsella rubella
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
mod(mdg4)
Drosophila melanogaster
FBgn0002781
N
GF19963
Drosophila ananassae
FBgn0096970
N
GG14638
Drosophila erecta
FBgn0106894
N
GI16938
Drosophila mojavensis
FBgn0139684
N
GL20574
Drosophila persimilis
FBgn0158169
N
GM11021
Drosophila sechellia
FBgn0165966
N
GJ14429
Drosophila virilis
FBgn0201640
N
GK18931
Drosophila willistoni
FBgn0220929
N
GE24991
Drosophila yakuba
FBgn0242084
N
GA30094
Drosophila pseudoobscura
FBgn0262046
N
pre-mod(mdg4)-B
Drosophila melanogaster
FBgn0266178
N