Ciclev10018691m.g (Citrus clementina)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Ciclev10018691m.g T286596_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CDC5
M02698_2.00 		Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN		 SELEX
Mathelier et al.(2014)
MA0579.1 		0.909 0.989
CDC5
M11037_2.00 		Arabidopsis thaliana
NVCGCTGAGBN
NVCTCAGCGBN		 Transfac
Matys et al.(2006)
P$CDC5_01 		0.909 0.989
CDC5L
M11049_2.00 		Homo sapiens
GWKTTAAYRTAD
HTAYRTTAAMWC		 Transfac
Matys et al.(2006)
V$CDC5_01 		0.814 0.880
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10018691m Myb 7 53
Ciclev10018691m Myb 59 103
Ciclev10019023m Myb 7 53
Ciclev10019023m Myb 59 103

Links

Other Myb/SANT family TFs
Other Citrus clementina TFs

575 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_01510 Capronia coronata A1O1_01510 N
A1O5_00212 Cladophialophora psammophila A1O5_00212 N
A1O5_04687 Cladophialophora psammophila A1O5_04687 N
ACRE_071560 Acremonium chrysogenum ACRE_071560 N
BAUCODRAFT_45255 Baudoinia compniacensis BAUCODRAFT_45255 N
CADANGAG00010600 Aspergillus niger CADANGAG00010600 N
ANIA_05691 Aspergillus nidulans CADANIAG00003374 I
ANIA_08103 Aspergillus nidulans CADANIAG00004135 N
NFIA_093200 Neosartorya fischeri CADNFIAG00008200 N
CFIO01_06855 Colletotrichum fioriniae CFIO01_06855 N
CFIO01_07975 Colletotrichum fioriniae CFIO01_07975 I
CGGC5_14706 Colletotrichum gloeosporioides CGGC5_14706 I
CSUB01_12509 Colletotrichum sublineola CSUB01_12509 I
EURHEDRAFT_460772 Aspergillus ruber EURHEDRAFT_460772 N
FFUJ_00121 Fusarium fujikuroi FFUJ_00121 I
G647_00858 Cladophialophora carrionii G647_00858 I
HMPREF1120_05946 Exophiala dermatitidis HMPREF1120_05946 N
JL09_g5708 Pichia kudriavzevii JL09_g5708 N
JL09_g5821 Pichia kudriavzevii JL09_g5821 N
OIDMADRAFT_109168 Oidiodendron maius OIDMADRAFT_109168 I
PV04_06351 Capronia semiimmersa PV04_06351 N
PV05_04579 Exophiala xenobiotica PV05_04579 N
PV07_03849 Cladophialophora immunda PV07_03849 N
PV07_08856 Cladophialophora immunda PV07_08856 I
PV09_05539 Verruconis gallopava PV09_05539 N
PV10_00765 Exophiala mesophila PV10_00765 N
PV10_06879 Exophiala mesophila PV10_06879 N
PV11_00229 Exophiala sideris PV11_00229 N
PV11_02090 Exophiala sideris PV11_02090 N
TSTA_122850 Talaromyces stipitatus TSTA_122850 I
VDBG_02399 Verticillium albo atrum VDBG_02399 I
VDBG_02399 Verticillium alfalfae VDBG_02399 I
Z518_03279 Rhinocladiella mackenziei Z518_03279 N
Z519_00213 Cladophialophora bantiana Z519_00213 N
Z519_02517 Cladophialophora bantiana Z519_02517 N