CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Eucgr.B03985 *(Eucalyptus grandis)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00249 (Myb_DNA-binding)	IPR014778	Eucgr.B03985	T286780_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
MYB108 M07065_2.00	Arabidopsis thaliana	RCCWAAYYNNNNHNH	DNDNNNNRRTTWGGY	Dap-seq OMalley et al.(2016) BOS1_col_a	0.798	0.892
MYB62 M07027_2.00	Arabidopsis thaliana	NHRCCTAAYTWNHNN	NNDNWARTTAGGYDN	Dap-seq OMalley et al.(2016) MYB62_col_a	0.749	0.806
MYB62 M07028_2.00	Arabidopsis thaliana	HNKRCCTAACTHH	DDAGTTAGGYMND	Dap-seq OMalley et al.(2016) MYB62_colamp_a	0.749	0.806
MYB116 M07014_2.00	Arabidopsis thaliana	NRCCTAAYTWNWNNN	NNNWNWARTTAGGYN	Dap-seq OMalley et al.(2016) MYB116_col_a	0.712	0.763
MYB116 M07015_2.00	Arabidopsis thaliana	HNTRCCTAACTHH	DDAGTTAGGYAND	Dap-seq OMalley et al.(2016) MYB116_colamp_a	0.712	0.763
MYB05_ANTMA M11067_2.00	Antirrhinum majus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$MYB305_Q3	0.686	0.828
ATMYB121 M07091_2.00	Arabidopsis thaliana	NYNWACCTAMYHHH	DDDRKTAGGTWNRN	Dap-seq OMalley et al.(2016) MYB121_col_a	0.685	0.699
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Eucgr.B03985.1	Myb	24	71	RGPWTVEEDLSLMNYVASHGEGRWNSLARSAGLRRTGKSCRLRWLNYL
Eucgr.B03985.1	Myb	77	122	RGNITLEEQLLILDLHSRWGNRWSKIAQYLPGRTDNEIKNYWRTRV

Links
Other Myb/SANT family TFs
Other *Eucalyptus grandis* TFs