Eucgr.D02225 (Eucalyptus grandis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Eucgr.D02225 T286825_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KAN2
M07018_2.00 		Arabidopsis thaliana
HHHNDWATATTCTYH
DRAGAATATWHNDDD		 Dap-seq
OMalley et al.(2016)
KAN2_col_a 		0.909 1.000
KAN2
M07019_2.00 		Arabidopsis thaliana
NWWTATTCYYH
DRRGAATAWWN		 Dap-seq
OMalley et al.(2016)
KAN2_colamp_a 		0.909 1.000
KAN1
M00878_2.00 		Arabidopsis thaliana
NNRTNBNN
NNVNAYNN		 PBM
Franco-Zorrilla et al.(2014)
KAN1 		0.875 0.957
KAN1
M02308_2.00 		Arabidopsis thaliana
NDNDTAHNHN
NDNDTAHNHN		 PBM
Weirauch et al.(2014)
pTH7135 		0.875 0.957
KAN4
M00881_2.00 		Arabidopsis thaliana
NWNRTBCNN
NNGVAYNWN		 PBM
Franco-Zorrilla et al.(2014)
KAN4 		0.786 0.915
AT1G14600
M01268_2.00 		Arabidopsis thaliana
NWAYATTCYN
NRGAATRTWN		 PBM
Lambert et al.(2019)
pTH11557 		0.667 0.723
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.D02225.1 Myb 194 245

Links

Other Myb/SANT family TFs
Other Eucalyptus grandis TFs

395 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF566 Bos taurus ENSBTAG00000031686 I
ZNF566 Callithrix jacchus ENSCJAG00000009444 I
Zfp566 Dipodomys ordii ENSDORG00000015427 I
ZNF566 Homo sapiens ENSG00000186017 D
ZNF566 Gorilla gorilla ENSGGOG00000003095 I
Zfp566 Mus musculus ENSMUSG00000078768 I
ENSNLEG00000003052 Nomascus leucogenys ENSNLEG00000003052 I
ENSPPYG00000009902 Pongo abelii ENSPPYG00000009902 I
ZNF566 Pan troglodytes ENSPTRG00000010896 I
Zfp566 Rattus norvegicus ENSRNOG00000048138 I