CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.E00234
(
Eucalyptus grandis
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Eucgr.E00234
T286836_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
KAN2
M07018_2.00
Arabidopsis thaliana
HHHNDWATATTCTYH
DRAGAATATWHNDDD
Dap-seq
OMalley et al.(2016)
KAN2_col_a
0.909
1.000
KAN2
M07019_2.00
Arabidopsis thaliana
NWWTATTCYYH
DRRGAATAWWN
Dap-seq
OMalley et al.(2016)
KAN2_colamp_a
0.909
1.000
KAN1
M00878_2.00
Arabidopsis thaliana
NNRTNBNN
NNVNAYNN
PBM
Franco-Zorrilla et al.(2014)
KAN1
0.875
0.957
KAN1
M02308_2.00
Arabidopsis thaliana
NDNDTAHNHN
NDNDTAHNHN
PBM
Weirauch et al.(2014)
pTH7135
0.875
0.957
KAN4
M00881_2.00
Arabidopsis thaliana
NWNRTBCNN
NNGVAYNWN
PBM
Franco-Zorrilla et al.(2014)
KAN4
0.786
0.915
AT1G14600
M01268_2.00
Arabidopsis thaliana
NWAYATTCYN
NRGAATRTWN
PBM
Lambert et al.(2019)
pTH11557
0.667
0.723
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.E00234.1
Myb
215
266
RMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYR
Links
Other
Myb/SANT
family TFs
Other
Eucalyptus grandis
TFs
395 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R015342
Calypte anna
Aan_R015342
N
Brh_R011790
Buceros rhinoceros
Brh_R011790
N
ENSAMEG00000007472
Ailuropoda melanoleuca
ENSAMEG00000007472
N
ENSAPLG00000005524
Anas platyrhynchos
ENSAPLG00000005524
N
NFX1
Bos taurus
ENSBTAG00000012385
N
NFX1
Canis familiaris
ENSCAFG00000001848
N
NFX1
Choloepus hoffmanni
ENSCHOG00000009225
N
NFX1
Cavia porcellus
ENSCPOG00000003470
N
ENSCSAG00000009971
Chlorocebus sabaeus
ENSCSAG00000009971
N
NFX1
Dasypus novemcinctus
ENSDNOG00000002079
N
Nfx1
Dipodomys ordii
ENSDORG00000001989
N
ENSFALG00000013143
Ficedula albicollis
ENSFALG00000013143
N
ENSFCAG00000007905
Felis catus
ENSFCAG00000007905
N
NFX1
Homo sapiens
ENSG00000086102
N
NFX1
Gorilla gorilla
ENSGGOG00000006751
N
ENSLACG00000000769
Latimeria chalumnae
ENSLACG00000000769
N
NFX1
Loxodonta africana
ENSLAFG00000012270
N
ENSLOCG00000011211
Lepisosteus oculatus
ENSLOCG00000011211
N
NFX1
Myotis lucifugus
ENSMLUG00000011069
N
NFX1
Monodelphis domestica
ENSMODG00000003990
N
ENSMPUG00000004111
Mustela putorius furo
ENSMPUG00000004111
N
Nfx1
Mus musculus
ENSMUSG00000028423
N
ENSNLEG00000005096
Nomascus leucogenys
ENSNLEG00000005096
N
ENSOARG00000009478
Ovis aries
ENSOARG00000009478
N
NFX1
Otolemur garnettii
ENSOGAG00000000775
N
ENSP00000368856
Macaca fascicularis
ENSP00000368856
N
ENSP00000368856-D1
Bos grunniens
ENSP00000368856-D1
N
ENSPANG00000025304
Papio anubis
ENSPANG00000025304
N
ENSPPYG00000019136
Pongo abelii
ENSPPYG00000019136
N
NFX1
Pan troglodytes
ENSPTRG00000020858
N
NFX1
Pteropus vampyrus
ENSPVAG00000011479
N
Nfx1
Rattus norvegicus
ENSRNOG00000009015
N
ENSSHAG00000010272
Sarcophilus harrisii
ENSSHAG00000010272
N
Myotis_brandtii_NFX1_10010343
Myotis brandtii
Myotis_brandtii_NFX1_10010343
N
Tal_R011854
Tyto alba
Tal_R011854
N
XP_002935327
Xenopus tropicalis
XP_002935327
N