Eucgr.E00234 (Eucalyptus grandis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Eucgr.E00234 T286836_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
KAN2
M07018_2.00
Arabidopsis thaliana
HHHNDWATATTCTYH

DRAGAATATWHNDDD
Dap-seq
OMalley et al.(2016)
KAN2_col_a
0.909 1.000
KAN2
M07019_2.00
Arabidopsis thaliana
NWWTATTCYYH

DRRGAATAWWN
Dap-seq
OMalley et al.(2016)
KAN2_colamp_a
0.909 1.000
KAN1
M00878_2.00
Arabidopsis thaliana
NNRTNBNN

NNVNAYNN
PBM
Franco-Zorrilla et al.(2014)
KAN1
0.875 0.957
KAN1
M02308_2.00
Arabidopsis thaliana
NDNDTAHNHN

NDNDTAHNHN
PBM
Weirauch et al.(2014)
pTH7135
0.875 0.957
KAN4
M00881_2.00
Arabidopsis thaliana
NWNRTBCNN

NNGVAYNWN
PBM
Franco-Zorrilla et al.(2014)
KAN4
0.786 0.915
AT1G14600
M01268_2.00
Arabidopsis thaliana
NWAYATTCYN

NRGAATRTWN
PBM
Lambert et al.(2019)
pTH11557
0.667 0.723
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.E00234.1 Myb 215 266

Links

Other Myb/SANT family TFs
Other Eucalyptus grandis TFs

395 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R015342 Calypte anna Aan_R015342 N
Brh_R011790 Buceros rhinoceros Brh_R011790 N
ENSAMEG00000007472 Ailuropoda melanoleuca ENSAMEG00000007472 N
ENSAPLG00000005524 Anas platyrhynchos ENSAPLG00000005524 N
NFX1 Bos taurus ENSBTAG00000012385 N
NFX1 Canis familiaris ENSCAFG00000001848 N
NFX1 Choloepus hoffmanni ENSCHOG00000009225 N
NFX1 Cavia porcellus ENSCPOG00000003470 N
ENSCSAG00000009971 Chlorocebus sabaeus ENSCSAG00000009971 N
NFX1 Dasypus novemcinctus ENSDNOG00000002079 N
Nfx1 Dipodomys ordii ENSDORG00000001989 N
ENSFALG00000013143 Ficedula albicollis ENSFALG00000013143 N
ENSFCAG00000007905 Felis catus ENSFCAG00000007905 N
NFX1 Homo sapiens ENSG00000086102 N
NFX1 Gorilla gorilla ENSGGOG00000006751 N
ENSLACG00000000769 Latimeria chalumnae ENSLACG00000000769 N
NFX1 Loxodonta africana ENSLAFG00000012270 N
ENSLOCG00000011211 Lepisosteus oculatus ENSLOCG00000011211 N
NFX1 Myotis lucifugus ENSMLUG00000011069 N
NFX1 Monodelphis domestica ENSMODG00000003990 N
ENSMPUG00000004111 Mustela putorius furo ENSMPUG00000004111 N
Nfx1 Mus musculus ENSMUSG00000028423 N
ENSNLEG00000005096 Nomascus leucogenys ENSNLEG00000005096 N
ENSOARG00000009478 Ovis aries ENSOARG00000009478 N
NFX1 Otolemur garnettii ENSOGAG00000000775 N
ENSP00000368856 Macaca fascicularis ENSP00000368856 N
ENSP00000368856-D1 Bos grunniens ENSP00000368856-D1 N
ENSPANG00000025304 Papio anubis ENSPANG00000025304 N
ENSPPYG00000019136 Pongo abelii ENSPPYG00000019136 N
NFX1 Pan troglodytes ENSPTRG00000020858 N
NFX1 Pteropus vampyrus ENSPVAG00000011479 N
Nfx1 Rattus norvegicus ENSRNOG00000009015 N
ENSSHAG00000010272 Sarcophilus harrisii ENSSHAG00000010272 N
Myotis_brandtii_NFX1_10010343 Myotis brandtii Myotis_brandtii_NFX1_10010343 N
Tal_R011854 Tyto alba Tal_R011854 N
XP_002935327 Xenopus tropicalis XP_002935327 N