evm.TU.supercontig_178.22 (Carica papaya)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 evm.TU.supercontig_178.22 T287075_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.892 0.957
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.892 0.957
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.892 0.957
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.797 0.848
OS08G0157600
M02330_2.00 		Oryza sativa
DNRTATCHN
NDGATAYNH		 PBM
Weirauch et al.(2014)
pTH7793 		0.788 0.870
LHY
M06997_2.00 		Arabidopsis thaliana
NWAAATATCT
AGATATTTWN		 Dap-seq
OMalley et al.(2016)
LHY1_col_a 		0.779 0.826
LHY
M06998_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LHY1_colamp_a 		0.779 0.826
CCA1
M00875_2.00 		Arabidopsis thaliana
NDNRWATCN
NGATWYNHN		 PBM
Franco-Zorrilla et al.(2014)
CCA1 		0.755 0.848
CCA1
M11039_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CCA1_Q5 		0.755 0.848
RVE5
M01079_2.00 		Arabidopsis thaliana
NWAATATCHN
NDGATATTWN		 PBM
Sullivan et al.(2014)
pTH7138 		0.734 0.674
RVE5
M07100_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At4g01280_col_a 		0.734 0.674
RVE5
M07101_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At4g01280_colamp_a 		0.734 0.674
RVE7
M01069_2.00 		Arabidopsis thaliana
NDHRWATCNN
NNGATWYDHN		 PBM
Sullivan et al.(2014)
pTH7081 		0.714 0.761
RVE7
M02286_2.00 		Arabidopsis thaliana
NDARTATCH
DGATAYTHN		 PBM
Weirauch et al.(2014)
pTH7277 		0.714 0.761
RVE7L
M07071_2.00 		Arabidopsis thaliana
NNNNWAAATATCWNN
NNWGATATTTWNNNN		 Dap-seq
OMalley et al.(2016)
AT3G10113_col_a 		0.714 0.761
RVE7
M07008_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
EPR1_colamp_a 		0.714 0.761
RVE7
M07009_2.00 		Arabidopsis thaliana
NWAAATATCTHN
NDAGATATTTWN		 Dap-seq
OMalley et al.(2016)
EPR1_col 		0.714 0.761
mybG
M02319_2.00 		Dictyostelium discoideum
WAATATCT
AGATATTW		 PBM
Weirauch et al.(2014)
pTH5362 		0.693 0.674
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_178.22 Myb 57 102

Links

Other Myb/SANT family TFs
Other Carica papaya TFs

309 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACLA_049380 Aspergillus clavatus CADACLAG00004982 N 0.000
CADAFLAG00001991 Aspergillus flavus CADAFLAG00001991 N 0.000
AFUA_4G10160 Aspergillus fumigatus CADAFUAG00008194 N 0.000
CADANGAG00004402 Aspergillus niger CADANGAG00004402 N 0.000
CADAORAG00001747 Aspergillus oryzae CADAORAG00001747 N 0.000
ATEG_00722 Aspergillus terreus CADATEAG00006314 N 0.000
NFIA_105890 Neosartorya fischeri CADNFIAG00010028 N 0.000
EURHEDRAFT_523773 Aspergillus ruber EURHEDRAFT_523773 N 0.000
fgenesh1_pm.00609_#_169 Aspergillus carbonarius fgenesh1_pm.00609_#_169 N 0.000
Pc22g12360 Penicillium chrysogenum Pc22g12360 N 0.000
PCH_Pc22g12360 Penicillium rubens PCH_Pc22g12360 N 0.000
PDE_03964 Penicillium oxalicum PDE_03964 N 0.000
PEX1_008880 Penicillium expansum PEX1_008880 N 0.000
PITC_045150 Penicillium italicum PITC_045150 N 0.000
PMAA_096830 Talaromyces marneffei PMAA_096830 N 0.000
PMAA_096830 Penicillium marneffei PMAA_096830 N 0.000
PVAR5_4287 Byssochlamys spectabilis PVAR5_4287 N 0.000
TSTA_044310 Talaromyces stipitatus TSTA_044310 N 0.000
U727_00434374151 Penicillium solitum U727_00434374151 N 0.000