CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
evm.TU.supercontig_29.114
(
Carica papaya
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
evm.TU.supercontig_29.114
T287119_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_29.114
Myb
14
61
KGPWTAEEDKKLINFIITNGHCCWRAVPKLAGLRRCGKSCRLRWTNYF
evm.model.supercontig_29.114
Myb
67
96
RGLLTDFEEQLVIDLHARLGNSLLTCKLCW
Links
Other
Myb/SANT
family TFs
Other
Carica papaya
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29005.m000265
Ricinus communis
29005.m000265
N
0.696
Ca_14339
Cicer arietinum
Ca_14339
N
0.702
LjSGA_050296.1
Lotus japonicus
LjSGA_050296.1
N
0.703
mgf023707m
Mimulus guttatus
mgf023707m
N
0.667
Pavir.Aa01543
Panicum virgatum
Pavir.Aa01543
N
0.680
Pavir.Fa00215
Panicum virgatum
Pavir.Fa00215
N
0.723
SELMODRAFT_39496
Selaginella moellendorffii
SELMODRAFT_39496
N
0.678
SELMODRAFT_39499
Selaginella moellendorffii
SELMODRAFT_39499
N
0.678
Traes_6DL_D1B5EA05F
Triticum aestivum
Traes_6DL_D1B5EA05F
N
0.745