gene18104-v1.0-hybrid (Fragaria vesca)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 gene18104-v1.0-hybrid T287328_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RVE8
M01074_2.00 		Arabidopsis thaliana
NNNRWATCNN
NNGATWYNNN		 PBM
Sullivan et al.(2014)
pTH7136 		0.909 1.000
RVE8
M07069_2.00 		Arabidopsis thaliana
NHNWAAATATCT
AGATATTTWNDN		 Dap-seq
OMalley et al.(2016)
At3g09600_col_a 		0.909 1.000
RVE8
M07070_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At3g09600_colamp_a 		0.909 1.000
RVE4
M07117_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LCL1_colamp_a 		0.909 0.978
RVE4
M07118_2.00 		Arabidopsis thaliana
NAAAATATCT
AGATATTTTN		 Dap-seq
OMalley et al.(2016)
LCL1_col 		0.909 0.978
PK02532.1
M02347_2.00 		Cannabis sativa
WAATATCTN
NAGATATTW		 PBM
Weirauch et al.(2014)
pTH9579 		0.901 0.957
RVE6
M01081_2.00 		Arabidopsis thaliana
AATATCTD
HAGATATT		 PBM
Sullivan et al.(2014)
pTH7151 		0.891 0.935
RVE6
M07138_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At5g52660_col_a 		0.891 0.935
RVE6
M07139_2.00 		Arabidopsis thaliana
NNNWAAATATCT
AGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
At5g52660_colamp_a 		0.891 0.935
mybG
M02319_2.00 		Dictyostelium discoideum
WAATATCT
AGATATTW		 PBM
Weirauch et al.(2014)
pTH5362 		0.818 0.891
RVE5
M01079_2.00 		Arabidopsis thaliana
NWAATATCHN
NDGATATTWN		 PBM
Sullivan et al.(2014)
pTH7138 		0.795 0.870
RVE5
M07100_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At4g01280_col_a 		0.795 0.870
RVE5
M07101_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At4g01280_colamp_a 		0.795 0.870
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.706 0.717
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.670 0.674
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.670 0.674
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.670 0.674
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna18104.1-v1.0-hybrid Myb 21 66

Links

Other Myb/SANT family TFs
Other Fragaria vesca TFs

334 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_01715 Capronia coronata A1O1_01715 I
A1O3_08338 Capronia epimyces A1O3_08338 N
A1O5_11047 Cladophialophora psammophila A1O5_11047 N
A1O7_05233 Cladophialophora yegresii A1O7_05233 N
A1O9_12607 Exophiala aquamarina A1O9_12607 N
ACRE_005080 Acremonium chrysogenum ACRE_005080 I
AUEXF2481DRAFT_1990 Aureobasidium subglaciale AUEXF2481DRAFT_1990 I
BAUCODRAFT_53101 Baudoinia compniacensis BAUCODRAFT_53101 I
BBA_03162 Beauveria bassiana BBA_03162 I
Bcin02g02300 Botrytis cinerea Bcin02g02300 I
BDDG_09774 Blastomyces dermatitidis BDDG_09774 I
ACLA_027040 Aspergillus clavatus CADACLAG00002999 I
CADAFLAG00004136 Aspergillus flavus CADAFLAG00004136 I
CADANGAG00006293 Aspergillus niger CADANGAG00006293 I
CCM_04761 Cordyceps militaris CCM_04761 I
CFIO01_13406 Colletotrichum fioriniae CFIO01_13406 I
CGGC5_10716 Colletotrichum gloeosporioides CGGC5_10716 I
CH063_01246 Colletotrichum higginsianum CH063_01246 I
CIMG_02531 Coccidioides immitis CIMG_02531 I
CMQ_4895 Grosmannia clavigera CMQ_4895 I
Cob_07346 Colletotrichum orbiculare Cob_07346 I
CPC735_037910 Coccidioides posadasii CPC735_037910 I
CPUR_08385 Claviceps purpurea CPUR_08385 I
CSUB01_09077 Colletotrichum sublineola CSUB01_09077 I
CTHT_0008390 Chaetomium thermophilum CTHT_0008390 I
DOTSEDRAFT_69772 Dothistroma septosporum DOTSEDRAFT_69772 I
EURHEDRAFT_22412 Aspergillus ruber EURHEDRAFT_22412 I
F503_04373 Ophiostoma piceae uamh F503_04373 I
FFUJ_00821 Fusarium fujikuroi FFUJ_00821 I
fgenesh1_pg.sca_1_chr1_3_0000687 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0000687 I
fgenesh3_pm.C_scaffold_10000323 Neurospora discreta fgenesh3_pm.C_scaffold_10000323 I
FGRRES_00318 Fusarium graminearum FGRRES_00318 I
FPSE_07692 Fusarium pseudograminearum FPSE_07692 I
G647_03448 Cladophialophora carrionii G647_03448 I
GGTG_12982 Gaeumannomyces graminis GGTG_12982 I
GLRG_07358 Colletotrichum graminicola GLRG_07358 I
GMDG_00077 Pseudogymnoascus destructans GMDG_00077 I
GSTUM_00009411001 Tuber melanosporum GSTUM_00009411001 N
gw1.2.720.1 Cryphonectria parasitica gw1.2.720.1 I
gw1.2.915.1 Mycosphaerella graminicola gw1.2.915.1 I
H101_04388 Trichophyton interdigitale H101_04388 I
H102_02726 Trichophyton rubrum H102_02726 I
H105_02744 Trichophyton soudanense H105_02744 I
HCBG_07944 Histoplasma capsulatum HCBG_07944 I
HMPREF1120_09254 Exophiala dermatitidis HMPREF1120_09254 N
HMPREF1541_11021 Cyphellophora europaea HMPREF1541_11021 N
HMPREF1624_03400 Sporothrix schenckii HMPREF1624_03400 I
M437DRAFT_12002 Aureobasidium melanogenum M437DRAFT_12002 I
M438DRAFT_283552 Aureobasidium pullulans M438DRAFT_283552 I
MAC_06559 Metarhizium acridum MAC_06559 I
MAJ_07299 Metarhizium majus MAJ_07299 I
MAM_00987 Metarhizium album MAM_00987 I
MANI_017733 Metarhizium anisopliae MANI_017733 I
MAPG_08672 Magnaporthe poae MAPG_08672 I
MBM_02301 Marssonina brunnea MBM_02301 I
MBR_05142 Metarhizium brunneum MBR_05142 I
MCYG_05302 Microsporum canis MCYG_05302 I
MCYG_05302 Arthroderma otae MCYG_05302 I
MGG_15357 Magnaporthe oryzae MGG_15357 I
MGU_01530 Metarhizium guizhouense MGU_01530 I
MGYG_06353 Microsporum gypseum MGYG_06353 I
MYCFIDRAFT_150925 Pseudocercospora fijiensis MYCFIDRAFT_150925 I
Mycgr3G18493 Zymoseptoria tritici Mycgr3G18493 I
MYCTH_109046 Myceliophthora thermophila MYCTH_109046 I
NCU01706 Neurospora crassa NCU01706 D
NechaG75076 Fusarium solani NechaG75076 I
NEUTE1DRAFT_101778 Neurospora tetrasperma NEUTE1DRAFT_101778 I
OCS_06093 Ophiocordyceps sinensis OCS_06093 I
Pc12g05270 Penicillium chrysogenum Pc12g05270 I
PCH_Pc12g05270 Penicillium rubens PCH_Pc12g05270 I
PDE_02360 Penicillium oxalicum PDE_02360 I
PDIP_34590 Penicillium digitatum PDIP_34590 I
PEX1_091250 Penicillium expansum PEX1_091250 I
PITC_075220 Penicillium italicum PITC_075220 I
PMAA_096140 Penicillium marneffei PMAA_096140 I
PMAA_096140 Talaromyces marneffei PMAA_096140 I
PV04_03970 Capronia semiimmersa PV04_03970 N
PV05_06707 Exophiala xenobiotica PV05_06707 N
PV10_03876 Exophiala mesophila PV10_03876 I
PVAR5_6000 Byssochlamys spectabilis PVAR5_6000 I
S40285_03377 Stachybotrys chlorohalonata S40285_03377 I
S40288_05289 Stachybotrys chartarum S40288_05289 I
SEPMUDRAFT_123869 Sphaerulina musiva SEPMUDRAFT_123869 I
SPBR_01773 Sporothrix brasiliensis SPBR_01773 I
SS1G_01859 Sclerotinia sclerotiorum SS1G_01859 I
TEQG_06211 Trichophyton equinum TEQG_06211 I
TESG_03699 Trichophyton tonsurans TESG_03699 I
THITE_16965 Thielavia terrestris THITE_16965 I
TRIATDRAFT_289913 Trichoderma atroviride TRIATDRAFT_289913 I
TRIREDRAFT_1941 Trichoderma reesei TRIREDRAFT_1941 I
TRV_05271 Trichophyton verrucosum TRV_05271 I
TSTA_045180 Talaromyces stipitatus TSTA_045180 I
TSTA_106970 Talaromyces stipitatus TSTA_106970 I
U727_0043108001 Penicillium solitum U727_0043108001 I
UCREL1_549 Eutypa lata UCREL1_549 I
UV8b_756 Ustilaginoidea virens UV8b_756 I
VDAG_06776 Verticillium dahliae VDAG_06776 I
X797_006944 Metarhizium robertsii X797_006944 I
Z519_06848 Cladophialophora bantiana Z519_06848 I