Lus10014015.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10014015.g T287970_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RVE8
M01074_2.00 		Arabidopsis thaliana
NNNRWATCNN
NNGATWYNNN		 PBM
Sullivan et al.(2014)
pTH7136 		0.909 1.000
RVE8
M07069_2.00 		Arabidopsis thaliana
NHNWAAATATCT
AGATATTTWNDN		 Dap-seq
OMalley et al.(2016)
At3g09600_col_a 		0.909 1.000
RVE8
M07070_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At3g09600_colamp_a 		0.909 1.000
RVE4
M07117_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LCL1_colamp_a 		0.909 0.978
RVE4
M07118_2.00 		Arabidopsis thaliana
NAAAATATCT
AGATATTTTN		 Dap-seq
OMalley et al.(2016)
LCL1_col 		0.909 0.978
PK02532.1
M02347_2.00 		Cannabis sativa
WAATATCTN
NAGATATTW		 PBM
Weirauch et al.(2014)
pTH9579 		0.901 0.957
RVE6
M01081_2.00 		Arabidopsis thaliana
AATATCTD
HAGATATT		 PBM
Sullivan et al.(2014)
pTH7151 		0.891 0.935
RVE6
M07138_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At5g52660_col_a 		0.891 0.935
RVE6
M07139_2.00 		Arabidopsis thaliana
NNNWAAATATCT
AGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
At5g52660_colamp_a 		0.891 0.935
mybG
M02319_2.00 		Dictyostelium discoideum
WAATATCT
AGATATTW		 PBM
Weirauch et al.(2014)
pTH5362 		0.818 0.891
RVE5
M01079_2.00 		Arabidopsis thaliana
NWAATATCHN
NDGATATTWN		 PBM
Sullivan et al.(2014)
pTH7138 		0.795 0.870
RVE5
M07100_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At4g01280_col_a 		0.795 0.870
RVE5
M07101_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At4g01280_colamp_a 		0.795 0.870
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.706 0.717
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.670 0.674
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.670 0.674
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.670 0.674
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10014015 Myb 136 181

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

334 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000006001 Ailuropoda melanoleuca ENSAMEG00000006001 N
TERF1 Bos taurus ENSBTAG00000032982 N
ENSBTAP00000044076-D1 Bos grunniens ENSBTAP00000044076-D1 N
TERF1 Canis familiaris ENSCAFG00000007975 N
TERF1 Choloepus hoffmanni ENSCHOG00000002407 N
TERF1 Callithrix jacchus ENSCJAG00000007714 N
TERF1 Cavia porcellus ENSCPOG00000009638 N
ENSCSAG00000013598 Chlorocebus sabaeus ENSCSAG00000013598 N
ENSDNOG00000011332 Dasypus novemcinctus ENSDNOG00000011332 N
Terf1 Dipodomys ordii ENSDORG00000003657 N
TERF1 Equus caballus ENSECAG00000011894 N
TERF1 Erinaceus europaeus ENSEEUG00000008963 N
TERF1 Homo sapiens ENSG00000147601 N
ENSGGOG00000025393 Gorilla gorilla ENSGGOG00000025393 N
TERF1 Gorilla gorilla ENSGGOG00000026727 N
TERF1 Loxodonta africana ENSLAFG00000004308 N
TERF1 Myotis lucifugus ENSMLUG00000012171 N
TERF1 Macaca mulatta ENSMMUG00000023208 N
ENSMODG00000025642 Monodelphis domestica ENSMODG00000025642 N
ENSMPUG00000010251 Mustela putorius furo ENSMPUG00000010251 N
Terf1 Mus musculus ENSMUSG00000025925 N
TERF1 Ornithorhynchus anatinus ENSOANG00000001722 N
ENSOARG00000005381 Ovis aries ENSOARG00000005381 N
ENSOCUG00000002793 Oryctolagus cuniculus ENSOCUG00000002793 N
ENSP00000276603 Macaca fascicularis ENSP00000276603 N
ENSPANG00000025943 Papio anubis ENSPANG00000025943 N
TERF1 Procavia capensis ENSPCAG00000007698 N
ENSPPYG00000003709 Pongo abelii ENSPPYG00000003709 N
ENSPPYG00000018261 Pongo abelii ENSPPYG00000018261 N
ENSPPYG00000018669 Pongo abelii ENSPPYG00000018669 N
TERF1 Pan troglodytes ENSPTRG00000022919 N
TERF1 Pteropus vampyrus ENSPVAG00000003792 N
TERF1 Sus scrofa ENSSSCG00000006184 N
ENSSTOG00000004560 Ictidomys tridecemlineatus ENSSTOG00000004560 N
ENSSTOG00000025051 Ictidomys tridecemlineatus ENSSTOG00000025051 N
ENSSTOG00000026069 Ictidomys tridecemlineatus ENSSTOG00000026069 N
TERF1 Tupaia belangeri ENSTBEG00000011779 N
TERF1 Tursiops truncatus ENSTTRG00000003745 N
TERF1 Vicugna pacos ENSVPAG00000000533 N
Myotis_brandtii_TERF1_10031667 Myotis brandtii Myotis_brandtii_TERF1_10031667 N