Lus10028248.g (Linum usitatissimum)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Lus10028248.g T288103_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAX3
M02700_2.00 		Arabidopsis thaliana
SCACCTACCHCCN
NGGDGGTAGGTGS		 SELEX
Mathelier et al.(2014)
MA0576.1 		0.824 0.925
RAX3
M11043_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB84_01 		0.824 0.925
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10028248 Myb 14 62
Lus10028248 Myb 68 113

Links

Other Myb/SANT family TFs
Other Linum usitatissimum TFs

486 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bm3977 Brugia malayi Bm3977 N
BTMF_0000394201 Brugia timori BTMF_0000394201 N
EEL_0000786501 Elaeophora elaphi EEL_0000786501 N
LOAG_13153 Loa loa LOAG_13153 N
nAv.1.0.1.g00394 Acanthocheilonema viteae nAv.1.0.1.g00394 N
nLs.2.1.2.g03395 Litomosoides sigmodontis nLs.2.1.2.g03395 N
WBGene00245748 Onchocerca volvulus WBGene00245748 N