CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Lus10033473.g *(Linum usitatissimum)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00249 (Myb_DNA-binding)	IPR014778	Lus10033473.g	T288152_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
MYB4 M02303_2.00	Arabidopsis thaliana	YACCWACY	RGTWGGTR	PBM Weirauch et al.(2014) pTH7075	0.781	0.860
MYB4 M07115_2.00	Arabidopsis thaliana	NYYACCWAMHWHNDD	HHNDWDKTWGGTRRN	Dap-seq OMalley et al.(2016) MYB4_col200_a	0.781	0.860
MYB3 M02288_2.00	Arabidopsis thaliana	NNYACCTACCN	NGGTAGGTRNN	PBM Weirauch et al.(2014) pTH7125	0.758	0.860
MYB83 M01073_2.00	Arabidopsis thaliana	YACCHACC	GGTDGGTR	PBM Sullivan et al.(2014) pTH7140	0.671	0.667
MYB83 M07066_2.00	Arabidopsis thaliana	YCACCAACHNH	DNDGTTGGTGR	Dap-seq OMalley et al.(2016) MYB83_col_a	0.671	0.667
MYB83 M07067_2.00	Arabidopsis thaliana	NCACCWAMCDNHNNN	NNNDNHGKTWGGTGN	Dap-seq OMalley et al.(2016) MYB83_colamp_a	0.671	0.667
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Lus10033473	Myb	14	61	KGAWTKEEDQRLISYINLHGQGCWRSLPRAAGLFRCGKSCRLRWINYL
Lus10033473	Myb	67	112	RGNFTHQEDELIINLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHL

Links
Other Myb/SANT family TFs
Other *Linum usitatissimum* TFs