MDP0000581293 (Malus domestica)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 MDP0000581293 T288651_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.857 0.913
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.857 0.913
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.857 0.913
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.826 0.870
OS08G0157600
M02330_2.00 		Oryza sativa
DNRTATCHN
NDGATAYNH		 PBM
Weirauch et al.(2014)
pTH7793 		0.817 0.870
LHY
M06997_2.00 		Arabidopsis thaliana
NWAAATATCT
AGATATTTWN		 Dap-seq
OMalley et al.(2016)
LHY1_col_a 		0.808 0.826
LHY
M06998_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LHY1_colamp_a 		0.808 0.826
CCA1
M00875_2.00 		Arabidopsis thaliana
NDNRWATCN
NGATWYNHN		 PBM
Franco-Zorrilla et al.(2014)
CCA1 		0.772 0.848
CCA1
M11039_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CCA1_Q5 		0.772 0.848
RVE7
M01069_2.00 		Arabidopsis thaliana
NDHRWATCNN
NNGATWYDHN		 PBM
Sullivan et al.(2014)
pTH7081 		0.743 0.783
RVE7
M02286_2.00 		Arabidopsis thaliana
NDARTATCH
DGATAYTHN		 PBM
Weirauch et al.(2014)
pTH7277 		0.743 0.783
RVE7L
M07071_2.00 		Arabidopsis thaliana
NNNNWAAATATCWNN
NNWGATATTTWNNNN		 Dap-seq
OMalley et al.(2016)
AT3G10113_col_a 		0.743 0.783
RVE7
M07008_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
EPR1_colamp_a 		0.743 0.783
RVE7
M07009_2.00 		Arabidopsis thaliana
NWAAATATCTHN
NDAGATATTTWN		 Dap-seq
OMalley et al.(2016)
EPR1_col 		0.743 0.783
RVE5
M01079_2.00 		Arabidopsis thaliana
NWAATATCHN
NDGATATTWN		 PBM
Sullivan et al.(2014)
pTH7138 		0.706 0.696
RVE5
M07100_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At4g01280_col_a 		0.706 0.696
RVE5
M07101_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At4g01280_colamp_a 		0.706 0.696
RVE8
M01074_2.00 		Arabidopsis thaliana
NNNRWATCNN
NNGATWYNNN		 PBM
Sullivan et al.(2014)
pTH7136 		0.699 0.717
RVE8
M07069_2.00 		Arabidopsis thaliana
NHNWAAATATCT
AGATATTTWNDN		 Dap-seq
OMalley et al.(2016)
At3g09600_col_a 		0.699 0.717
RVE8
M07070_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At3g09600_colamp_a 		0.699 0.717
PK02532.1
M02347_2.00 		Cannabis sativa
WAATATCTN
NAGATATTW		 PBM
Weirauch et al.(2014)
pTH9579 		0.699 0.696
RVE4
M07117_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LCL1_colamp_a 		0.699 0.696
RVE4
M07118_2.00 		Arabidopsis thaliana
NAAAATATCT
AGATATTTTN		 Dap-seq
OMalley et al.(2016)
LCL1_col 		0.699 0.696
RVE6
M01081_2.00 		Arabidopsis thaliana
AATATCTD
HAGATATT		 PBM
Sullivan et al.(2014)
pTH7151 		0.689 0.674
RVE6
M07138_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At5g52660_col_a 		0.689 0.674
RVE6
M07139_2.00 		Arabidopsis thaliana
NNNWAAATATCT
AGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
At5g52660_colamp_a 		0.689 0.674
mybG
M02319_2.00 		Dictyostelium discoideum
WAATATCT
AGATATTW		 PBM
Weirauch et al.(2014)
pTH5362 		0.665 0.696
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000581293 Myb 97 142

Links

Other Myb/SANT family TFs
Other Malus domestica TFs

481 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R011488 Calypte anna Aan_R011488 I
Afo_R004723 Aptenodytes forsteri Afo_R004723 I
Alligator_sinensis_CCG014115.1 Alligator sinensis Alligator_sinensis_CCG014115.1 I
Brh_R001903 Buceros rhinoceros Brh_R001903 I
Cmyd_10008872 Chelonia mydas Cmyd_10008872 I
Cmyd_10013042 Chelonia mydas Cmyd_10013042 I
Cmyd_10014540 Chelonia mydas Cmyd_10014540 I
PROX1 Anolis carolinensis ENSACAG00000006174 I
ENSAMEG00000015776 Ailuropoda melanoleuca ENSAMEG00000015776 I
ENSAMEG00000018305 Ailuropoda melanoleuca ENSAMEG00000018305 I
ENSAMXG00000011717 Astyanax mexicanus ENSAMXG00000011717 I
ENSAMXG00000012231 Astyanax mexicanus ENSAMXG00000012231 I
ENSAMXG00000014376 Astyanax mexicanus ENSAMXG00000014376 I
ENSAPLG00000010950 Anas platyrhynchos ENSAPLG00000010950 I
PROX1 Bos taurus ENSBTAG00000010978 I
PROX2 Bos taurus ENSBTAG00000015052 I
ENSBTAP00000014573-D1 Bos grunniens ENSBTAP00000014573-D1 I
PROX1 Canis familiaris ENSCAFG00000012445 I
PROX2 Canis familiaris ENSCAFG00000016985 I
PROX2 Choloepus hoffmanni ENSCHOG00000000477 I
PROX1 Callithrix jacchus ENSCJAG00000015514 I
PROX2 Callithrix jacchus ENSCJAG00000020548 I
PROX2 Cavia porcellus ENSCPOG00000009322 I
PROX1 Cavia porcellus ENSCPOG00000011987 I
ENSCSAG00000012283 Chlorocebus sabaeus ENSCSAG00000012283 I
prox2 Danio rerio ENSDARG00000041952 I
prox1a Danio rerio ENSDARG00000055158 I
prox1b Danio rerio ENSDARG00000088810 I
PROX1 Dasypus novemcinctus ENSDNOG00000001297 I
PROX2 Dasypus novemcinctus ENSDNOG00000005528 I
PROX1 Equus caballus ENSECAG00000019220 I
ENSECAG00000023529 Equus caballus ENSECAG00000023529 I
ENSFALG00000006312 Ficedula albicollis ENSFALG00000006312 I
ENSFALG00000012357 Ficedula albicollis ENSFALG00000012357 I
PROX2 Felis catus ENSFCAG00000028658 I
PROX1 Felis catus ENSFCAG00000029702 I
PROX1 Homo sapiens ENSG00000117707 D
PROX2 Homo sapiens ENSG00000119608 I
prox2 Gasterosteus aculeatus ENSGACG00000007538 I
prox1a Gasterosteus aculeatus ENSGACG00000010140 I
ENSGACG00000014345 Gasterosteus aculeatus ENSGACG00000014345 I
PROX1 Gallus gallus ENSGALG00000009791 I
PROX1 Gorilla gorilla ENSGGOG00000015130 I
PROX2 Gorilla gorilla ENSGGOG00000022893 I
ENSGMOG00000001679 Gadus morhua ENSGMOG00000001679 I
ENSGMOG00000009022 Gadus morhua ENSGMOG00000009022 I
ENSGMOG00000015166 Gadus morhua ENSGMOG00000015166 I
ENSLACG00000018909 Latimeria chalumnae ENSLACG00000018909 I
PROX1 Loxodonta africana ENSLAFG00000006344 I
PROX2 Loxodonta africana ENSLAFG00000012545 I
ENSLOCG00000010701 Lepisosteus oculatus ENSLOCG00000010701 I
ENSLOCG00000016698 Lepisosteus oculatus ENSLOCG00000016698 I
ENSMEUG00000002316 Macropus eugenii ENSMEUG00000002316 I
ENSMEUG00000013465 Macropus eugenii ENSMEUG00000013465 I
PROX1 Meleagris gallopavo ENSMGAG00000009635 I
ENSMICG00000006078 Microcebus murinus ENSMICG00000006078 I
PROX1 Microcebus murinus ENSMICG00000011593 I
PROX2 Myotis lucifugus ENSMLUG00000005898 I
PROX1 Myotis lucifugus ENSMLUG00000006993 I
PROX1 Macaca mulatta ENSMMUG00000011914 I
ENSMODG00000006137 Monodelphis domestica ENSMODG00000006137 I
ENSMPUG00000009289 Mustela putorius furo ENSMPUG00000009289 I
ENSMPUG00000013456 Mustela putorius furo ENSMPUG00000013456 I
Prox1 Mus musculus ENSMUSG00000010175 I
Prox2 Mus musculus ENSMUSG00000042320 I
ENSNLEG00000014435 Nomascus leucogenys ENSNLEG00000014435 I
ENSNLEG00000016325 Nomascus leucogenys ENSNLEG00000016325 I
PROX2 Ornithorhynchus anatinus ENSOANG00000009815 I
ENSOARG00000001473 Ovis aries ENSOARG00000001473 I
ENSOARG00000009324 Ovis aries ENSOARG00000009324 I
PROX2 Oryctolagus cuniculus ENSOCUG00000021246 I
PROX2 Otolemur garnettii ENSOGAG00000001327 I
PROX1 Otolemur garnettii ENSOGAG00000017025 I
ENSONIG00000012467 Oreochromis niloticus ENSONIG00000012467 I
ENSONIG00000013518 Oreochromis niloticus ENSONIG00000013518 I
ENSONIG00000015279 Oreochromis niloticus ENSONIG00000015279 I
ENSONIG00000020193 Oreochromis niloticus ENSONIG00000020193 I
PROX1 Ochotona princeps ENSOPRG00000005115 I
PROX2 Ochotona princeps ENSOPRG00000011820 I
ENSORLG00000001996 Oryzias latipes ENSORLG00000001996 I
prox1a Oryzias latipes ENSORLG00000014947 I
prox2 Oryzias latipes ENSORLG00000016587 I
ENSP00000355925 Macaca fascicularis ENSP00000355925 I
ENSP00000405932-D1 Bos grunniens ENSP00000405932-D1 I
ENSPANG00000017714 Papio anubis ENSPANG00000017714 I
ENSPANG00000024084 Papio anubis ENSPANG00000024084 I
ENSPFOG00000003774 Poecilia formosa ENSPFOG00000003774 I
ENSPFOG00000014635 Poecilia formosa ENSPFOG00000014635 I
ENSPFOG00000015503 Poecilia formosa ENSPFOG00000015503 I
ENSPMAG00000006606 Petromyzon marinus ENSPMAG00000006606 I
ENSPPYG00000000224 Pongo abelii ENSPPYG00000000224 I
ENSPPYG00000005992 Pongo abelii ENSPPYG00000005992 I
ENSPSIG00000008098 Pelodiscus sinensis ENSPSIG00000008098 I
ENSPSIG00000017015 Pelodiscus sinensis ENSPSIG00000017015 I
PROX1 Pan troglodytes ENSPTRG00000001974 I
PROX2 Pan troglodytes ENSPTRG00000006542 I
PROX2 Pteropus vampyrus ENSPVAG00000000659 I
PROX1 Pteropus vampyrus ENSPVAG00000009067 I
Prox1 Rattus norvegicus ENSRNOG00000003694 I
Prox2 Rattus norvegicus ENSRNOG00000005054 I
ENSSHAG00000018304 Sarcophilus harrisii ENSSHAG00000018304 I
PROX2 Sus scrofa ENSSSCG00000002373 I
PROX1 Sus scrofa ENSSSCG00000015584 I
ENSSTOG00000023253 Ictidomys tridecemlineatus ENSSTOG00000023253 I
PROX1 Taeniopygia guttata ENSTGUG00000002974 I
ENSTGUG00000012170 Taeniopygia guttata ENSTGUG00000012170 I
ENSTNIG00000004923 Tetraodon nigroviridis ENSTNIG00000004923 I
prox1a Tetraodon nigroviridis ENSTNIG00000016378 I
prox2 Tetraodon nigroviridis ENSTNIG00000017414 I
ENSTRUG00000010061 Takifugu rubripes ENSTRUG00000010061 I
ENSTRUG00000012738 Takifugu rubripes ENSTRUG00000012738 I
prox1a Takifugu rubripes ENSTRUG00000013890 I
prox2 Takifugu rubripes ENSTRUG00000018353 I
PROX2 Tursiops truncatus ENSTTRG00000001912 I
PROX2 Vicugna pacos ENSVPAG00000003072 I
ENSXMAG00000003709 Xiphophorus maculatus ENSXMAG00000003709 I
ENSXMAG00000014663 Xiphophorus maculatus ENSXMAG00000014663 I
e_gw.483.46.1 Branchiostoma floridae e_gw.483.46.1 I
Gfo_R010932 Geospiza fortis Gfo_R010932 I
Myotis_brandtii_Prox1_10018243 Myotis brandtii Myotis_brandtii_Prox1_10018243 I
Myotis_brandtii_PROX2_10012935 Myotis brandtii Myotis_brandtii_PROX2_10012935 I
Ogr11789 Ophisaurus gracilis Ogr11789 I
Pvit_00353 Pogona vitticeps Pvit_00353 I
Tal_R002989 Tyto alba Tal_R002989 I
prox1 Xenopus tropicalis XB-GENE-485327 I
prox1.L Xenopus laevis XB-GENE-485331 I