orange1.1g019948m.g (Citrus sinensis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 orange1.1g019948m.g T288814_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK00738.1
M02346_2.00 		Cannabis sativa
NYWATCYDNN
NNHRGATWRN		 PBM
Weirauch et al.(2014)
pTH9487 		0.909 1.000
KUA1
M02312_2.00 		Arabidopsis thaliana
NNTTATCCDN
NHGGATAANN		 PBM
Weirauch et al.(2014)
pTH7647 		0.888 0.936
KUA1
M07136_2.00 		Arabidopsis thaliana
WWHHTTATCCAHWW
WWDTGGATAADDWW		 Dap-seq
OMalley et al.(2016)
At5g47390_colamp_a 		0.888 0.936
KUA1
M07137_2.00 		Arabidopsis thaliana
HHWDYHTTATCCAHW
WDTGGATAADRHWDD		 Dap-seq
OMalley et al.(2016)
At5g47390_col_b 		0.888 0.936
PK29550.1
M02358_2.00 		Cannabis sativa
NNHDATCYNN
NNRGATHDNN		 PBM
Weirauch et al.(2014)
pTH9595 		0.860 0.957
AT3G16350
M01078_2.00 		Arabidopsis thaliana
NYTATCYDNN
NNHRGATARN		 PBM
Sullivan et al.(2014)
pTH7149 		0.850 0.936
fgenesh1_pg.scaffold_70000111
M02342_2.00 		Physcomitrella patens
NNHNATCBN
NVGATNDNN		 PBM
Weirauch et al.(2014)
pTH8492 		0.829 0.915
PK23829.1
M02355_2.00 		Cannabis sativa
VTTATCCD
HGGATAAB		 PBM
Weirauch et al.(2014)
pTH9592 		0.822 0.894
AT5G61620
M07149_2.00 		Arabidopsis thaliana
WWHHTTATCCAHWWN
NWWDTGGATAADDWW		 Dap-seq
OMalley et al.(2016)
AT5G61620_col_a 		0.813 0.830
AT5G61620
M07150_2.00 		Arabidopsis thaliana
YHTTATCCAHW
WDTGGATAADR		 Dap-seq
OMalley et al.(2016)
AT5G61620_colamp_a 		0.813 0.830
PK17526.1
M02353_2.00 		Cannabis sativa
NNTTATCCAN
NTGGATAANN		 PBM
Weirauch et al.(2014)
pTH9588 		0.811 0.851
AT1G19000
M02287_2.00 		Arabidopsis thaliana
NYTATCYDNN
NNHRGATARN		 PBM
Weirauch et al.(2014)
pTH7120 		0.809 0.830
AT1G19000
M07012_2.00 		Arabidopsis thaliana
HDYHTTATCCAHWW
WWDTGGATAADRHD		 Dap-seq
OMalley et al.(2016)
At1g19000_col_a 		0.809 0.830
AT1G19000
M07013_2.00 		Arabidopsis thaliana
WDYNTTATCCAHWW
WWDTGGATAANRHW		 Dap-seq
OMalley et al.(2016)
At1g19000_colamp_a 		0.809 0.830
AT5G56840
M07144_2.00 		Arabidopsis thaliana
WWYMTTATCCAWWWN
NWWWTGGATAAKRWW		 Dap-seq
OMalley et al.(2016)
AT5G56840_col_a 		0.768 0.809
AT5G56840
M07145_2.00 		Arabidopsis thaliana
HHHWWYHTTATCCWHW
WDWGGATAADRWWDDD		 Dap-seq
OMalley et al.(2016)
AT5G56840_colamp_a 		0.768 0.809
0600010132
M02360_2.00 		Ostreococcus tauri
NNVTTATCCDNNN
NNNHGGATAABNN		 PBM
Weirauch et al.(2014)
pTH9441 		0.762 0.830
AT3G10580
M07072_2.00 		Arabidopsis thaliana
AWBCTTATCYWHWHH
DDWDWRGATAAGVWT		 Dap-seq
OMalley et al.(2016)
AT3G10580_col_a 		0.710 0.681
AT3G10580
M07073_2.00 		Arabidopsis thaliana
CCGAWAAWNTCGGDD
HHCCGANWTTWTCGG		 Dap-seq
OMalley et al.(2016)
AT3G10580_colamp_a 		0.710 0.681
AT1G74840
M02291_2.00 		Arabidopsis thaliana
NGWTATCCRNN
NNYGGATAWCN		 PBM
Weirauch et al.(2014)
pTH7074 		0.691 0.809
AT1G74840
M07037_2.00 		Arabidopsis thaliana
HHTTATCCAHW
WDTGGATAADD		 Dap-seq
OMalley et al.(2016)
At1g74840_col100_a 		0.691 0.809
AT1G74840
M07038_2.00 		Arabidopsis thaliana
HWNHTTATCCAHWW
WWDTGGATAADNWD		 Dap-seq
OMalley et al.(2016)
At1g74840_colamp_a 		0.691 0.809
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g019948m Myb 95 142

Links

Other Myb/SANT family TFs
Other Citrus sinensis TFs

588 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_050290 Acremonium chrysogenum ACRE_050290 I 0.000
AUEXF2481DRAFT_75192 Aureobasidium subglaciale AUEXF2481DRAFT_75192 I 0.000
BBA_08340 Beauveria bassiana BBA_08340 I 0.000
CCM_05801 Cordyceps militaris CCM_05801 I 0.000
CFIO01_11202 Colletotrichum fioriniae CFIO01_11202 I 0.000
CGGC5_11787 Colletotrichum gloeosporioides CGGC5_11787 I 0.000
CH063_03691 Colletotrichum higginsianum CH063_03691 I 0.000
CHGG_03006 Chaetomium globosum CHGG_03006 I 0.000
CMQ_3574 Grosmannia clavigera CMQ_3574 I 0.000
Cob_05805 Colletotrichum orbiculare Cob_05805 I 0.000
CPUR_06147 Claviceps purpurea CPUR_06147 I 0.000
CSUB01_11183 Colletotrichum sublineola CSUB01_11183 I 0.000
CTHT_0027300 Chaetomium thermophilum CTHT_0027300 I 0.000
estExt_fgenesh1_pg.C_10757 Cryphonectria parasitica estExt_fgenesh1_pg.C_10757 I 0.000
estExt_fgenesh1_pm.C_sca_10_chr8_2_00283 Nectria haematococca estExt_fgenesh1_pm.C_sca_10_chr8_2_00283 I 0.000
estExt_fgenesh3_pm.C_50535 Neurospora discreta estExt_fgenesh3_pm.C_50535 I 0.000
F503_05269 Ophiostoma piceae uamh F503_05269 I 0.000
FFUJ_08512 Fusarium fujikuroi FFUJ_08512 I 0.000
FGRRES_05388 Fusarium graminearum FGRRES_05388 I 0.000
FOXG_09518 Fusarium oxysporum FOXG_09518 I 0.000
FPSE_09301 Fusarium pseudograminearum FPSE_09301 I 0.000
FVEG_07145 Fusarium verticillioides FVEG_07145 I 0.000
GGTG_09531 Gaeumannomyces graminis GGTG_09531 I 0.000
GLRG_08404 Colletotrichum graminicola GLRG_08404 I 0.000
HMPREF1624_03038 Sporothrix schenckii HMPREF1624_03038 I 0.000
M437DRAFT_55484 Aureobasidium melanogenum M437DRAFT_55484 I 0.000
M7I_6126 Glarea lozoyensis M7I_6126 I 0.000
MAC_06478 Metarhizium acridum MAC_06478 I 0.000
MAJ_03634 Metarhizium majus MAJ_03634 I 0.000
MAM_01651 Metarhizium album MAM_01651 I 0.000
MANI_018274 Metarhizium anisopliae MANI_018274 I 0.000
MAPG_02573 Magnaporthe poae MAPG_02573 I 0.000
MBR_07520 Metarhizium brunneum MBR_07520 I 0.000
MGG_06258 Magnaporthe oryzae MGG_06258 I 0.000
MGU_03813 Metarhizium guizhouense MGU_03813 I 0.000
MPH_05348 Macrophomina phaseolina MPH_05348 I 0.000
MYCTH_2304475 Myceliophthora thermophila MYCTH_2304475 I 0.000
NCU00019 Neurospora crassa NCU00019 D 0.000
NechaG105094 Fusarium solani NechaG105094 I 0.000
NEUTE1DRAFT_129588 Neurospora tetrasperma NEUTE1DRAFT_129588 I 0.000
OCS_06320 Ophiocordyceps sinensis OCS_06320 I 0.000
OIDMADRAFT_176187 Oidiodendron maius OIDMADRAFT_176187 I 0.000
PFICI_05264 Pestalotiopsis fici PFICI_05264 I 0.000
PODANS_7_5690 Podospora anserina PODANS_7_5690 I 0.000
S40285_00418 Stachybotrys chlorohalonata S40285_00418 I 0.000
S40288_00189 Stachybotrys chartarum S40288_00189 I 0.000
SAPIO_CDS5401 Scedosporium apiospermum SAPIO_CDS5401 I 0.000
SMAC_00110 Sordaria macrospora SMAC_00110 I 0.000
tetur27g00040 Tetranychus urticae tetur27g00040 I 0.000
THITE_2119283 Thielavia terrestris THITE_2119283 I 0.000
TRIATDRAFT_145960 Trichoderma atroviride TRIATDRAFT_145960 I 0.000
TRIREDRAFT_70517 Trichoderma reesei TRIREDRAFT_70517 I 0.000
TRIVIDRAFT_51092 Trichoderma virens TRIVIDRAFT_51092 I 0.000
UCREL1_2890 Eutypa lata UCREL1_2890 I 0.000
UCRNP2_293 Neofusicoccum parvum UCRNP2_293 I 0.000
UV8b_1686 Ustilaginoidea virens UV8b_1686 I 0.000
VDAG_06619 Verticillium dahliae VDAG_06619 I 0.000
VHEMI01479 Torrubiella hemipterigena VHEMI01479 I 0.000
X797_003372 Metarhizium robertsii X797_003372 I 0.000