CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ba00321
(
Panicum virgatum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Pavir.Ba00321
T289006_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ba00321.1.p
Myb
245
280
VEKYGKGNWKDIKMAYPDVFEGRSTVDLKDKFRNME
Links
Other
Myb/SANT
family TFs
Other
Panicum virgatum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA038100
Oryza indica
BGIOSGA038100
N
0.675
OBART07G27500
Oryza barthii
OBART07G27500
N
0.675
OGLUM07G27460
Oryza glumaepatula
OGLUM07G27460
N
0.675
OLONG_015950
Oryza longistaminata
OLONG_015950
N
0.766
OPUNC07G25890
Oryza punctata
OPUNC07G25890
N
0.675
OS07G0695900
Oryza sativa
OS07G0695900
N
0.675
Sb01g016710
Sorghum bicolor
Sb01g016710
N
0.667