CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Eb00490
(
Panicum virgatum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
Pavir.Eb00490
T289155_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Eb00490.1.p
Myb
5
57
KQRWTSVEEAALRTGVAKHGVGNWRTILNDPELSSTLRYRSNVDLKDKWRNMN
Pavir.Eb00490.2.p
Myb
5
57
KQRWTSVEEAALRTGVAKHGVGNWRTILNDPELSSTLRYRSNVDLKDKWRNMN
Links
Other
Myb/SANT
family TFs
Other
Panicum virgatum
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_03014
Capronia coronata
A1O1_03014
N
0.000
A1O3_02022
Capronia epimyces
A1O3_02022
N
0.000
A1O5_03401
Cladophialophora psammophila
A1O5_03401
N
0.000
A1O9_10147
Exophiala aquamarina
A1O9_10147
N
0.000
G647_04266
Cladophialophora carrionii
G647_04266
N
0.000
HMPREF1120_06645
Exophiala dermatitidis
HMPREF1120_06645
N
0.000
PV04_04857
Capronia semiimmersa
PV04_04857
N
0.000
PV05_01527
Exophiala xenobiotica
PV05_01527
N
0.000
PV07_07712
Cladophialophora immunda
PV07_07712
N
0.000
PV08_10605
Exophiala spinifera
PV08_10605
N
0.000
PV10_00046
Exophiala mesophila
PV10_00046
N
0.000
Z517_12027
Fonsecaea pedrosoi
Z517_12027
N
0.000
Z518_10049
Rhinocladiella mackenziei
Z518_10049
N
0.000
Z519_10222
Cladophialophora bantiana
Z519_10222
N
0.000