LjSGA_060207.1 (Lotus japonicus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 LjSGA_060207.1 T290983_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAX3
M02700_2.00 		Arabidopsis thaliana
SCACCTACCHCCN
NGGDGGTAGGTGS		 SELEX
Mathelier et al.(2014)
MA0576.1 		0.826 0.914
RAX3
M11043_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB84_01 		0.826 0.914
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_060207.1 Myb 19 67
LjSGA_060207.1 Myb 73 118

Links

Other Myb/SANT family TFs
Other Lotus japonicus TFs

442 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CG4730 Drosophila melanogaster FBgn0039355 N
GG12229 Drosophila erecta FBgn0104521 N
GM10229 Drosophila sechellia FBgn0165180 N
GD18182 Drosophila simulans FBgn0189718 N
GE10678 Drosophila yakuba FBgn0228526 N