LjT02J13.100.nc (Lotus japonicus)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 LjT02J13.100.nc T291027_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK02532.1
M02347_2.00 		Cannabis sativa
WAATATCTN
NAGATATTW		 PBM
Weirauch et al.(2014)
pTH9579 		0.878 0.978
RVE8
M01074_2.00 		Arabidopsis thaliana
NNNRWATCNN
NNGATWYNNN		 PBM
Sullivan et al.(2014)
pTH7136 		0.870 0.935
RVE8
M07069_2.00 		Arabidopsis thaliana
NHNWAAATATCT
AGATATTTWNDN		 Dap-seq
OMalley et al.(2016)
At3g09600_col_a 		0.870 0.935
RVE8
M07070_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At3g09600_colamp_a 		0.870 0.935
RVE4
M07117_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
LCL1_colamp_a 		0.870 0.935
RVE4
M07118_2.00 		Arabidopsis thaliana
NAAAATATCT
AGATATTTTN		 Dap-seq
OMalley et al.(2016)
LCL1_col 		0.870 0.935
RVE6
M01081_2.00 		Arabidopsis thaliana
AATATCTD
HAGATATT		 PBM
Sullivan et al.(2014)
pTH7151 		0.868 0.957
RVE6
M07138_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At5g52660_col_a 		0.868 0.957
RVE6
M07139_2.00 		Arabidopsis thaliana
NNNWAAATATCT
AGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
At5g52660_colamp_a 		0.868 0.957
mybG
M02319_2.00 		Dictyostelium discoideum
WAATATCT
AGATATTW		 PBM
Weirauch et al.(2014)
pTH5362 		0.849 0.891
RVE5
M01079_2.00 		Arabidopsis thaliana
NWAATATCHN
NDGATATTWN		 PBM
Sullivan et al.(2014)
pTH7138 		0.834 0.913
RVE5
M07100_2.00 		Arabidopsis thaliana
NNAAAATATCT
AGATATTTTNN		 Dap-seq
OMalley et al.(2016)
At4g01280_col_a 		0.834 0.913
RVE5
M07101_2.00 		Arabidopsis thaliana
NNWAAATATCT
AGATATTTWNN		 Dap-seq
OMalley et al.(2016)
At4g01280_colamp_a 		0.834 0.913
PK08316.1
M02350_2.00 		Cannabis sativa
NNNRWATCNN
NNGATWYNNN		 PBM
Weirauch et al.(2014)
pTH9488 		0.706 0.696
RVE1
M00879_2.00 		Arabidopsis thaliana
AAATATCT
AGATATTT		 PBM
Franco-Zorrilla et al.(2014)
RVE1 		0.670 0.652
RVE1
M07128_2.00 		Arabidopsis thaliana
NNNWAAATATCTNN
NNAGATATTTWNNN		 Dap-seq
OMalley et al.(2016)
RVE1_col_a 		0.670 0.652
RVE1
M07129_2.00 		Arabidopsis thaliana
NNWAATATCW
WGATATTWNN		 Dap-seq
OMalley et al.(2016)
RVE1_colamp_a 		0.670 0.652
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LjT02J13.100.nc Myb 38 83

Links

Other Myb/SANT family TFs
Other Lotus japonicus TFs

334 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACEP15271 Atta cephalotes ACEP15271 N 0.000
CapteG214662 Capitella teleta CapteG214662 N 0.000
Cflo_03461--XP_391891.1_APIME Camponotus floridanus Cflo_03461--XP_391891.1_APIME N 0.000
CGI_10005894 Crassostrea gigas CGI_10005894 N 0.000
CLEC008069 Cimex lectularius CLEC008069 N 0.000
DAPPUDRAFT_303802 Daphnia pulex DAPPUDRAFT_303802 N 0.000
ENSPMAG00000000497 Petromyzon marinus ENSPMAG00000000497 I 0.000
GH13580 Drosophila grimshawi FBgn0121056 N 0.000
GI24194 Drosophila mojavensis FBgn0146917 N 0.000
GJ21463 Drosophila virilis FBgn0208589 N 0.000
GK18102 Drosophila willistoni FBgn0220101 N 0.000
GB55193 Apis mellifera GB55193 N 0.000
ISCW004149 Ixodes scapularis ISCW004149 N 0.000
L798_06852 Zootermopsis nevadensis L798_06852 N 0.000
MDOA000183 Musca domestica MDOA000183 N 0.000
NV13275 Nasonia vitripennis NV13275 N 0.000
Ocbimv22013214m.g Octopus bimaculoides Ocbimv22013214m.g I 0.000
Sakowv30043886m.g Saccoglossus kowalevskii Sakowv30043886m.g I 0.000
SINV25019 Solenopsis invicta SINV25019 N 0.000