PDK_20s1854611g001 (Phoenix dactylifera)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 PDK_20s1854611g001 T291208_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB83
M01073_2.00 		Arabidopsis thaliana
YACCHACC
GGTDGGTR		 PBM
Sullivan et al.(2014)
pTH7140 		0.756 0.710
MYB83
M07066_2.00 		Arabidopsis thaliana
YCACCAACHNH
DNDGTTGGTGR		 Dap-seq
OMalley et al.(2016)
MYB83_col_a 		0.756 0.710
MYB83
M07067_2.00 		Arabidopsis thaliana
NCACCWAMCDNHNNN
NNNDNHGKTWGGTGN		 Dap-seq
OMalley et al.(2016)
MYB83_colamp_a 		0.756 0.710
MYB46
M00877_2.00 		Arabidopsis thaliana
NAMCNDHHN
NDDHNGKTN		 PBM
Franco-Zorrilla et al.(2014)
MYB46 		0.712 0.710
MYB46
M11046_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB46_Q6 		0.712 0.710
MYB55
M00876_2.00 		Arabidopsis thaliana
ACCWAMCD
HGKTWGGT		 PBM
Franco-Zorrilla et al.(2014)
MYB55 		0.701 0.742
MYB55
M07102_2.00 		Arabidopsis thaliana
HNNNHBYAMCWAMCD
HGKTWGKTRVDNNND		 Dap-seq
OMalley et al.(2016)
MYB55_colamp_a 		0.701 0.742
MYB55
M07103_2.00 		Arabidopsis thaliana
NYNYAMCHACCRHH
DDYGGTDGKTRNRN		 Dap-seq
OMalley et al.(2016)
MYB55_col 		0.701 0.742
MYB61
M07002_2.00 		Arabidopsis thaliana
HNYAMCHACCDNHNH
DNDNHGGTDGKTRND		 Dap-seq
OMalley et al.(2016)
MYB61_col_a 		0.697 0.753
MYB61
M07003_2.00 		Arabidopsis thaliana
NHNYACCWAMCDH
DHGKTWGGTRNDN		 Dap-seq
OMalley et al.(2016)
MYB61_colamp_a 		0.697 0.753
ATY53
M07078_2.00 		Arabidopsis thaliana
YBYACCWAMCDHHNNNNNNNN
NNNNNNNNDDHGKTWGGTRVR		 Dap-seq
OMalley et al.(2016)
MYB67_col_a 		0.678 0.763
AtMYB74
M07104_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB74_colamp_a 		0.670 0.699
AtMYB74
M07105_2.00 		Arabidopsis thaliana
BYHYACCTAMYHHH
DDDRKTAGGTRDRV		 Dap-seq
OMalley et al.(2016)
MYB74_col 		0.670 0.699
PK28187.1
M01286_2.00 		Cannabis sativa
TACCTACC
GGTAGGTA		 PBM
Lambert et al.(2019)
pTH11305 		0.667 0.688
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1854611g001 Myb 14 61
PDK_20s1854611g001 Myb 67 112

Links

Other Myb/SANT family TFs
Other Phoenix dactylifera TFs

655 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29816.m000664 Ricinus communis 29816.m000664 N
30225.m001697 Ricinus communis 30225.m001697 N
AMTR_s00048p00210040 Amborella trichopoda AMTR_s00048p00210040 N
F775_04823 Aegilops tauschii F775_04823 I
GRMZM2G000818 Zea mays GRMZM2G000818 I
GRMZM2G124715 Zea mays GRMZM2G124715 I
MDP0000582174 Malus domestica MDP0000582174 N
mgf021550m Mimulus guttatus mgf021550m N
MLOC_69570 Hordeum vulgare MLOC_69570 I
OB05G25260 Oryza brachyantha OB05G25260 N
ORGLA12G0042500 Oryza glaberrima ORGLA12G0042500 N
Pavir.J22834 Panicum virgatum Pavir.J22834 N
PGSC0003DMG400006176 Solanum tuberosum PGSC0003DMG400006176 I
SapurV1A.3841s0010 Salix purpurea SapurV1A.3841s0010 N
TRIUR3_23036 Triticum urartu TRIUR3_23036 N
TRIUR3_28515 Triticum urartu TRIUR3_28515 N