CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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anac067
(
Arabidopsis thaliana
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
AT4G01520
T292083_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC68
M07214_2.00
Arabidopsis thaliana
RCTTVYNBNNYAAGY
RCTTRNNVNRBAAGY
Dap-seq
OMalley et al.(2016)
NTM1_col_a
0.991
0.940
NAC68
M07215_2.00
Arabidopsis thaliana
HDYYRCTTTTTNNHYHYHNNN
NNNDRDRDNNAAAAAGYRRHD
Dap-seq
OMalley et al.(2016)
NTM1_colamp_a
0.991
0.940
NAC69
M07216_2.00
Arabidopsis thaliana
WMCTTVTNNNNYAAG
CTTRNNNNABAAGKW
Dap-seq
OMalley et al.(2016)
NTM2_col_b
0.945
0.716
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT4G01520.1
NAC/NAM
5
136
PTGYRFSPTGEEVINHYLKNKILGKTWLVDEAISEINILNHKPSKDLPKLARIQSEDLEWYFFSPIEYTNPNKMKMKRTTGSGFWKPSGVDRKIRDKRGNGVVIGIKKTLVYHEGKSPHGVRTPWVMHEYHI
Links
Other
NAC/NAM
family TFs
Other
Arabidopsis thaliana
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MYB3
Arabidopsis thaliana
AT1G22640
D
BGIOSGA003044
Oryza indica
BGIOSGA003044
N
MDP0000305438
Malus domestica
MDP0000305438
N
MTR_6g055910
Medicago truncatula
MTR_6g055910
I
OBART01G07940
Oryza barthii
OBART01G07940
N
OGLUM01G09110
Oryza glumaepatula
OGLUM01G09110
N
ONIVA01G10240
Oryza nivara
ONIVA01G10240
N
ORUFI01G08780
Oryza rufipogon
ORUFI01G08780
N
ORUFI01G38020
Oryza rufipogon
ORUFI01G38020
N
PK07010.1
Cannabis sativa
PK07010.1
N
PK28029.1
Cannabis sativa
PK28029.1
N
PK28187.1
Cannabis sativa
PK28187.1
D
SapurV1A.2099s0020
Salix purpurea
SapurV1A.2099s0020
N
SapurV1A.2154s0020
Salix purpurea
SapurV1A.2154s0020
N
Thhalv10022197m.g
Eutrema salsugineum
Thhalv10022197m.g
N