Bra010193 (Brassica rapa)
NAC/NAM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02365 (NAM) IPR003441 Bra010193 T292568_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NTL9
M02371_2.00 		Arabidopsis thaliana
ATTACTTAA
TTAAGTAAT		 PBM
Weirauch et al.(2014)
pTH8207 		0.904 0.842
NTL9
M11081_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CBNAC_01 		0.904 0.842
NTL9
M11082_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CBNAC_02 		0.904 0.842
For this family, TFs with SR scores > 0.870 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra010193.1-P NAC/NAM 15 141

Links

Other NAC/NAM family TFs
Other Brassica rapa TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29822.m003403 Ricinus communis 29822.m003403 I
29950.m001154 Ricinus communis 29950.m001154 I
AMTR_s00064p00125250 Amborella trichopoda AMTR_s00064p00125250 I
Aquca_037_00296 Aquilegia coerulea Aquca_037_00296 I
TBP2 Arabidopsis thaliana AT1G55520 I
TBP1 Arabidopsis thaliana AT3G13445 I
BGIBMGA010619 Bombyx mori BGIBMGA010619 I
BGIOSGA037671 Oryza indica BGIOSGA037671 I
Bo2g007300 Brassica oleracea Bo2g007300 I
Bo3g185290 Brassica oleracea Bo3g185290 I
Bo5g132530 Brassica oleracea Bo5g132530 I
Bo6g051360 Brassica oleracea Bo6g051360 I
Bostr.3640s0136 Boechera stricta Bostr.3640s0136 I
Bostr.6758s0027 Boechera stricta Bostr.6758s0027 I
Bra011920 Brassica rapa Bra011920 I
Bra027434 Brassica rapa Bra027434 I
Bra028725 Brassica rapa Bra028725 I
Bra030855 Brassica rapa Bra030855 I
BRADI1G13220 Brachypodium distachyon BRADI1G13220 I
BRADI3G27190 Brachypodium distachyon BRADI3G27190 I
BRADI4G01150 Brachypodium distachyon BRADI4G01150 I
Cagra.0001s0028 Capsella grandiflora Cagra.0001s0028 I
Cagra.0690s0017 Capsella grandiflora Cagra.0690s0017 I
Carubv10010337m.g Capsella rubella Carubv10010337m.g I
Carubv10014676m.g Capsella rubella Carubv10014676m.g I
cassava22625.valid.m1 Manihot esculenta cassava22625.valid.m1 I
cassava35684.valid.m1 Manihot esculenta cassava35684.valid.m1 I
cassava35685.valid.m1 Manihot esculenta cassava35685.valid.m1 I
Ciclev10022324m.g Citrus clementina Ciclev10022324m.g I
Cucsa.142180 Cucumis sativus Cucsa.142180 I
DAPPUDRAFT_194512 Daphnia pulex DAPPUDRAFT_194512 I
ENSCSAG00000011839 Chlorocebus sabaeus ENSCSAG00000011839 I
estExt_Genewise1.C_2460019 Physcomitrella patens estExt_Genewise1.C_2460019 I
Eucgr.J01752 Eucalyptus grandis Eucgr.J01752 I
Eucgr.K01483 Eucalyptus grandis Eucgr.K01483 I
e_gw1.13.259.1 Physcomitrella patens e_gw1.13.259.1 I
TBP2 Arabidopsis lyrata fgenesh2_kg.1__4564__AT1G55520.2 I
TBP1 Arabidopsis lyrata fgenesh2_kg.3__1428__AT3G13445.1 I
GB47180 Apis mellifera GB47180 I
gene01591-v1.0-hybrid Fragaria vesca gene01591-v1.0-hybrid I
GLYMA03G04500 Glycine max GLYMA03G04500 I
GLYMA09G41330 Glycine max GLYMA09G41330 I
GLYMA16G25450 Glycine max GLYMA16G25450 I
GLYMA18G44460 Glycine max GLYMA18G44460 I
GLYMA19G28780 Glycine max GLYMA19G28780 I
Gorai.004G244700 Gossypium raimondii Gorai.004G244700 I
Gorai.007G288000 Gossypium raimondii Gorai.007G288000 I
Gorai.013G202900 Gossypium raimondii Gorai.013G202900 I
GRMZM2G149238 Zea mays GRMZM2G149238 I
GRMZM2G161418 Zea mays GRMZM2G161418 I
GSMUA_Achr1G26830_001 Musa acuminata GSMUA_Achr1G26830_001 I
GSMUA_Achr5G08990_001 Musa acuminata GSMUA_Achr5G08990_001 I
GSMUA_Achr6G23210_001 Musa acuminata GSMUA_Achr6G23210_001 I
HMEL016424 Heliconius melpomene HMEL016424 I
ISCW019416 Ixodes scapularis ISCW019416 I
KGM_04261 Danaus plexippus KGM_04261 I
LDEC008856 Leptinotarsa decemlineata LDEC008856 I
LjT45I18.100.nd Lotus japonicus LjT45I18.100.nd I
LLOJ006615 Lutzomyia longipalpis LLOJ006615 I
LPERR12G14180 Leersia perrieri LPERR12G14180 I
Lus10002634.g Linum usitatissimum Lus10002634.g I
Lus10020260.g Linum usitatissimum Lus10020260.g I
MCINX007129 Melitaea cinxia MCINX007129 I
mgf009543m Mimulus guttatus mgf009543m I
mgf012506m Mimulus guttatus mgf012506m I
MLOC_44969 Hordeum vulgare MLOC_44969 I
MLOC_50796 Hordeum vulgare MLOC_50796 I
MTR_7g072580 Medicago truncatula MTR_7g072580 I
OB03G33300 Oryza brachyantha OB03G33300 I
OB03G33310 Oryza brachyantha OB03G33310 I
OBART03G28150 Oryza barthii OBART03G28150 I
OBART12G16890 Oryza barthii OBART12G16890 I
OGLUM03G28780 Oryza glumaepatula OGLUM03G28780 I
OGLUM10G10700 Oryza glumaepatula OGLUM10G10700 I
OGLUM12G18540 Oryza glumaepatula OGLUM12G18540 I
OMERI03G24790 Oryza meridionalis OMERI03G24790 I
OMERI11G15350 Oryza meridionalis OMERI11G15350 I
ONIVA03G29180 Oryza nivara ONIVA03G29180 I
ONIVA12G15220 Oryza nivara ONIVA12G15220 I
OPUNC03G25660 Oryza punctata OPUNC03G25660 I
OPUNC10G09380 Oryza punctata OPUNC10G09380 I
OPUNC12G15370 Oryza punctata OPUNC12G15370 I
orange1.1g029591m.g Citrus sinensis orange1.1g029591m.g I
ORGLA03G0260300 Oryza glaberrima ORGLA03G0260300 I
ORGLA12G0202200 Oryza glaberrima ORGLA12G0202200 I
ORUFI12G18750 Oryza rufipogon ORUFI12G18750 I
TBP2 Oryza sativa OS03G0657000 I
OS12G0580300 Oryza sativa OS12G0580300 I
Pavir.Ib04166 Panicum virgatum Pavir.Ib04166 I
PDK_20s1328661g002 Phoenix dactylifera PDK_20s1328661g002 I
PDK_20s1715251g002 Phoenix dactylifera PDK_20s1715251g002 I
PK11932.1 Cannabis sativa PK11932.1 I
PK25605.1 Cannabis sativa PK25605.1 I
POPTR_0013s05580 Populus trichocarpa POPTR_0013s05580 I
POPTR_0019s04890 Populus trichocarpa POPTR_0019s04890 I
PPAI004956 Phlebotomus papatasi PPAI004956 I
PRUPE_ppa011711mg Prunus persica PRUPE_ppa011711mg I
SapurV1A.0308s0180 Salix purpurea SapurV1A.0308s0180 I
SapurV1A.0680s0010 Salix purpurea SapurV1A.0680s0010 I
Sb01g012880 Sorghum bicolor Sb01g012880 I
Sb08g022273 Sorghum bicolor Sb08g022273 I
SELMODRAFT_163230 Selaginella moellendorffii SELMODRAFT_163230 I
SELMODRAFT_270329 Selaginella moellendorffii SELMODRAFT_270329 I
Si023295m.g Setaria italica Si023295m.g I
Si037375m.g Setaria italica Si037375m.g I
Si038805m.g Setaria italica Si038805m.g I
Solyc01g028930.2 Solanum lycopersicum Solyc01g028930.2 I
TCM_026453 Theobroma cacao TCM_026453 I
tetur35g00490 Tetranychus urticae tetur35g00490 I
Thhalv10011790m.g Eutrema salsugineum Thhalv10011790m.g I
Thhalv10021552m.g Eutrema salsugineum Thhalv10021552m.g I
Traes_1AL_60B57FD46 Triticum aestivum Traes_1AL_60B57FD46 I
Traes_1BL_2CB2C53C1 Triticum aestivum Traes_1BL_2CB2C53C1 I
Traes_1BS_2CB2C53C1 Triticum aestivum Traes_1BS_2CB2C53C1 I
Traes_4BS_4F52653D8 Triticum aestivum Traes_4BS_4F52653D8 I
Traes_4DS_700213C0B Triticum aestivum Traes_4DS_700213C0B I
TRIUR3_20012 Triticum urartu TRIUR3_20012 I
TRIUR3_32346 Triticum urartu TRIUR3_32346 I
VIT_06s0004g00180 Vitis vinifera VIT_06s0004g00180 I
YQE_02631 Dendroctonus ponderosae YQE_02631 I