CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI1G17480
(
Brachypodium distachyon
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
BRADI1G17480
T292713_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC018
M07176_2.00
Arabidopsis thaliana
DYACGBMAYYD
HRRTKVCGTRH
Dap-seq
OMalley et al.(2016)
NAM_colamp_a
0.906
0.750
NAC018
M07177_2.00
Arabidopsis thaliana
WDNCKWNHNNNWYACGBMA
TKVCGTRWNNNDNWMGNHW
Dap-seq
OMalley et al.(2016)
NAM_col_v3a
0.906
0.750
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI1G17480.1
NAC/NAM
9
136
PPGFRFHPTDEELILHYLRNRAASAPCPVPIIADVDIYKFDPWDLPCQAVYGEQEWYFFSPRDRKYPNGIRPNRAAGSGYWKATGTDKPIHDPATGGEPVGVKKALVFYKGRPPKGSKTSWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Brachypodium distachyon
TFs
177 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACEP15271
Atta cephalotes
ACEP15271
N
ACYPI004884
Acyrthosiphon pisum
ACYPI004884
N
Cflo_03461--XP_391891.1_APIME
Camponotus floridanus
Cflo_03461--XP_391891.1_APIME
N
CGI_10005894
Crassostrea gigas
CGI_10005894
N
ENSGMOG00000003250
Gadus morhua
ENSGMOG00000003250
I
ENSPMAG00000000497
Petromyzon marinus
ENSPMAG00000000497
I
GH13580
Drosophila grimshawi
FBgn0121056
N
GJ21463
Drosophila virilis
FBgn0208589
N
GK18102
Drosophila willistoni
FBgn0220101
N
GB55193
Apis mellifera
GB55193
N
Hsal_01990--XP_391891.1_APIME
Harpegnathos saltator
Hsal_01990--XP_391891.1_APIME
N
L798_06852
Zootermopsis nevadensis
L798_06852
N
LLOJ008948
Lutzomyia longipalpis
LLOJ008948
N
NV13275
Nasonia vitripennis
NV13275
N
Ocbimv22013214m.g
Octopus bimaculoides
Ocbimv22013214m.g
I
Sakowv30043886m.g
Saccoglossus kowalevskii
Sakowv30043886m.g
I
SINV25019
Solenopsis invicta
SINV25019
N