CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI3G56080
(
Brachypodium distachyon
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
BRADI3G56080
T292770_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANAC050
M07200_2.00
Arabidopsis thaliana
CTTGHNNYNCAAGNA
TNCTTGNRNNDCAAG
Dap-seq
OMalley et al.(2016)
ANAC050_colamp_a
0.889
0.711
ANAC050
M07201_2.00
Arabidopsis thaliana
CTTGNNNHRCAMGBHA
TDVCKTGYDNNNCAAG
Dap-seq
OMalley et al.(2016)
ANAC050_col_v3a
0.889
0.711
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI3G56080.1
NAC/NAM
15
150
APGFRFHPTDEELVSYYLRRRVLGRRLRIDAIAEVDLYRLEPWDLPSLSRIRSRDSQWYFFARLDRKVAGAGAGGRGGPGNRTNRATPRGYWKTTGKDREVFHRGKAVGMKKTLVFHAGRAPKGDRTNWVMHEYRL
BRADI3G56080.3
NAC/NAM
15
150
APGFRFHPTDEELVSYYLRRRVLGRRLRIDAIAEVDLYRLEPWDLPSLSRIRSRDSQWYFFARLDRKVAGAGAGGRGGPGNRTNRATPRGYWKTTGKDREVFHRGKAVGMKKTLVFHAGRAPKGDRTNWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Brachypodium distachyon
TFs
69 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ECANG7_04683
Echinococcus canadensis
ECANG7_04683
I
0.000
EmuJ_000791300
Echinococcus multilocularis
EmuJ_000791300
I
0.000
PEQ_0000256101
Parascaris equorum
PEQ_0000256101
N
0.000
Sakowv30032966m.g
Saccoglossus kowalevskii
Sakowv30032966m.g
N
0.000
TTAC_0000586501
Hydatigera taeniaeformis
TTAC_0000586501
I
0.000