CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI4G42180
(
Brachypodium distachyon
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
BRADI4G42180
T292791_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI4G42180.1
NAC/NAM
23
160
APGFRFYPTEEELLGFYLRHRLSAAAARPQLHRVIPVVDVYAHHPSQLRSMAGEASARDAEQWFFFCPRAPERELRGGRPGRTAPSGYWKATGSPSYVFSSSSSSSSELIGVKRTMVFYHGRAPTGAKTRWKMNEYKA
Links
Other
NAC/NAM
family TFs
Other
Brachypodium distachyon
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Al_scaffold_0007_76
Arabidopsis lyrata
Al_scaffold_0007_76
I
0.000
Aquca_006_00159
Aquilegia coerulea
Aquca_006_00159
I
0.000
AT4G38900
Arabidopsis thaliana
AT4G38900
I
0.000
BGIOSGA029105
Oryza indica
BGIOSGA029105
I
0.000
BGIOSGA029106
Oryza indica
BGIOSGA029106
I
0.000
Bo3g149620
Brassica oleracea
Bo3g149620
I
0.000
Bo7g119550
Brassica oleracea
Bo7g119550
I
0.000
Bostr.25542s0069
Boechera stricta
Bostr.25542s0069
I
0.000
Bra010722
Brassica rapa
Bra010722
I
0.000
Bra033582
Brassica rapa
Bra033582
I
0.000
BRADI3G41980
Brachypodium distachyon
BRADI3G41980
I
0.000
BRADI5G14497
Brachypodium distachyon
BRADI5G14497
I
0.000
cassava30160.valid.m1
Manihot esculenta
cassava30160.valid.m1
I
0.000
cassava32399.m1
Manihot esculenta
cassava32399.m1
I
0.000
cassava38273.valid.m1
Manihot esculenta
cassava38273.valid.m1
I
0.000
cassava43164.valid.m1
Manihot esculenta
cassava43164.valid.m1
I
0.000
Ca_27693
Cicer arietinum
Ca_27693
I
0.000
Ciclev10028062m.g
Citrus clementina
Ciclev10028062m.g
I
0.000
Cla016124
Citrullus lanatus
Cla016124
I
0.000
Cla016125
Citrullus lanatus
Cla016125
I
0.000
Cucsa.062530
Cucumis sativus
Cucsa.062530
I
0.000
Cucsa.382180
Cucumis sativus
Cucsa.382180
I
0.000
Cucsa.382190
Cucumis sativus
Cucsa.382190
I
0.000
estExt_gwp_gw1.C_200078
Physcomitrella patens
estExt_gwp_gw1.C_200078
I
0.000
estExt_gwp_gw1.C_5120003
Physcomitrella patens
estExt_gwp_gw1.C_5120003
I
0.000
Eucgr.D00737
Eucalyptus grandis
Eucgr.D00737
I
0.000
Eucgr.I01335
Eucalyptus grandis
Eucgr.I01335
I
0.000
evm.TU.supercontig_150.7
Carica papaya
evm.TU.supercontig_150.7
I
0.000
evm.TU.supercontig_81.160
Carica papaya
evm.TU.supercontig_81.160
I
0.000
e_gw1.20.99.1
Physcomitrella patens
e_gw1.20.99.1
I
0.000
F775_32059
Aegilops tauschii
F775_32059
I
0.000
gene01680-v1.0-hybrid
Fragaria vesca
gene01680-v1.0-hybrid
I
0.000
gene23487-v1.0-hybrid
Fragaria vesca
gene23487-v1.0-hybrid
I
0.000
GLYMA04G02850
Glycine max
GLYMA04G02850
I
0.000
GLYMA11G11791
Glycine max
GLYMA11G11791
I
0.000
GLYMA11G13510
Glycine max
GLYMA11G13510
I
0.000
GLYMA12G04050
Glycine max
GLYMA12G04050
I
0.000
GLYMA12G05520
Glycine max
GLYMA12G05520
I
0.000
Gorai.001G243800
Gossypium raimondii
Gorai.001G243800
I
0.000
Gorai.005G015900
Gossypium raimondii
Gorai.005G015900
I
0.000
Gorai.005G248900
Gossypium raimondii
Gorai.005G248900
I
0.000
GRMZM2G332294
Zea mays
GRMZM2G332294
I
0.000
GRMZM2G473274
Zea mays
GRMZM2G473274
N
0.000
GSMUA_Achr11G14990_001
Musa acuminata
GSMUA_Achr11G14990_001
I
0.000
GSMUA_Achr3G12290_001
Musa acuminata
GSMUA_Achr3G12290_001
I
0.000
GSMUA_Achr5G25700_001
Musa acuminata
GSMUA_Achr5G25700_001
I
0.000
GSMUA_AchrUn_randomG00680_001
Musa acuminata
GSMUA_AchrUn_randomG00680_001
I
0.000
gw1.20.225.1
Physcomitrella patens
gw1.20.225.1
I
0.000
Lus10018061.g
Linum usitatissimum
Lus10018061.g
I
0.000
Lus10019376.g
Linum usitatissimum
Lus10019376.g
I
0.000
Lus10042057.g
Linum usitatissimum
Lus10042057.g
I
0.000
mgf000302m
Mimulus guttatus
mgf000302m
I
0.000
mgf004912m
Mimulus guttatus
mgf004912m
I
0.000
MLOC_64362
Hordeum vulgare
MLOC_64362
I
0.000
MLOC_64781
Hordeum vulgare
MLOC_64781
I
0.000
MLOC_75510
Hordeum vulgare
MLOC_75510
I
0.000
MTR_4g072090
Medicago truncatula
MTR_4g072090
I
0.000
OB09G23080
Oryza brachyantha
OB09G23080
I
0.000
OGLUM09G17020
Oryza glumaepatula
OGLUM09G17020
I
0.000
OMERI09G12160
Oryza meridionalis
OMERI09G12160
I
0.000
orange1.1g007579m.g
Citrus sinensis
orange1.1g007579m.g
I
0.000
RF2A
Oryza sativa
OS09G0516200
I
0.000
PDK_20s1312701g003
Phoenix dactylifera
PDK_20s1312701g003
I
0.000
PGSC0003DMG400001659
Solanum tuberosum
PGSC0003DMG400001659
I
0.000
PK00843.1
Cannabis sativa
PK00843.1
I
0.000
PK20942.1
Cannabis sativa
PK20942.1
D
0.000
POPTR_0004s17080
Populus trichocarpa
POPTR_0004s17080
I
0.000
POPTR_0009s12830
Populus trichocarpa
POPTR_0009s12830
I
0.000
POPTR_0017s05610
Populus trichocarpa
POPTR_0017s05610
I
0.000
SapurV1A.0091s0130
Salix purpurea
SapurV1A.0091s0130
I
0.000
SapurV1A.0379s0290
Salix purpurea
SapurV1A.0379s0290
I
0.000
Sb06g021350
Sorghum bicolor
Sb06g021350
I
0.000
Sb07g025490
Sorghum bicolor
Sb07g025490
I
0.000
SELMODRAFT_129846
Selaginella moellendorffii
SELMODRAFT_129846
I
0.000
SELMODRAFT_34663
Selaginella moellendorffii
SELMODRAFT_34663
I
0.000
SELMODRAFT_77868
Selaginella moellendorffii
SELMODRAFT_77868
I
0.000
Solyc01g110480.2
Solanum lycopersicum
Solyc01g110480.2
I
0.000
TCM_006766
Theobroma cacao
TCM_006766
I
0.000
TCM_019998
Theobroma cacao
TCM_019998
I
0.000
Thhalv10024895m.g
Eutrema salsugineum
Thhalv10024895m.g
I
0.000
Traes_2AL_FA1957F59
Triticum aestivum
Traes_2AL_FA1957F59
I
0.000
Traes_7BS_7B68879A9
Triticum aestivum
Traes_7BS_7B68879A9
I
0.000
Traes_7DS_3463CAE33
Triticum aestivum
Traes_7DS_3463CAE33
I
0.000
TRIUR3_31242
Triticum urartu
TRIUR3_31242
I
0.000
VIT_03s0038g00860
Vitis vinifera
VIT_03s0038g00860
I
0.000
VIT_05s0102g01120
Vitis vinifera
VIT_05s0102g01120
I
0.000