CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ANAC020
(
Arabidopsis lyrata
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
fgenesh2_kg.1__4648__AT1G54330.1
T292959_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANAC020
M07178_2.00
Arabidopsis thaliana
TTNCKTGHNNNDCAMGYHAHY
RDTDRCKTGHNNNDCAMGNAA
Dap-seq
OMalley et al.(2016)
ANAC020_col_v31
0.964
0.982
PK26618.1
M01292_2.00
Cannabis sativa
NNYAMGHHA
TDDCKTRNN
PBM
Lambert et al.(2019)
pTH11328
0.940
0.807
PK19314.1
M01291_2.00
Cannabis sativa
NNNNAMDNHW
WDNHKTNNNN
PBM
Lambert et al.(2019)
pTH11252
0.937
0.816
anac057
M07208_2.00
Arabidopsis thaliana
TNCKTGHNNNDCAMGYH
DRCKTGHNNNDCAMGNA
Dap-seq
OMalley et al.(2016)
ANAC057_col_a
0.924
0.728
anac057
M07209_2.00
Arabidopsis thaliana
WNCKTGHNNHDCAMGYHAYCD
HGRTDRCKTGHDNNDCAMGNW
Dap-seq
OMalley et al.(2016)
ANAC057_colamp_a
0.924
0.728
anac028
M01289_2.00
Arabidopsis thaliana
NTTGCGTRH
DYACGCAAN
PBM
Lambert et al.(2019)
pTH9962
0.918
0.798
anac028
M07179_2.00
Arabidopsis thaliana
CTTSHNNHDCAMGYWA
TWRCKTGHDNNDSAAG
Dap-seq
OMalley et al.(2016)
ANAC028_col_a
0.918
0.798
NAC045
M07194_2.00
Arabidopsis thaliana
TTNCTTSHNNNDCAMG
CKTGHNNNDSAAGNAA
Dap-seq
OMalley et al.(2016)
ANAC045_col_a
0.898
0.711
NAC045
M07195_2.00
Arabidopsis thaliana
TTNCTTSHNNNDCAMG
CKTGHNNNDSAAGNAA
Dap-seq
OMalley et al.(2016)
ANAC045_colamp_a
0.898
0.711
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_kg.1__4648__AT1G54330.1
NAC/NAM
7
133
PPGFRFHPTDEELVAYYLDRKVNGRAIELEIIPEVDLYKCEPWDLPEKSFLPGNDMEWYFYSTRDKKYPNGSRTNRATRAGYWKATGKDRIVESKKMKMGMKKTLVYYRGRAPHGLRTNWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Arabidopsis lyrata
TFs
200 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy