CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA05G36031
(
Glycine max
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
GLYMA05G36031
T293037_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
anac075
M07223_2.00
Arabidopsis thaliana
CTTSWNNNWYAMGYT
ARCKTRWNNNWSAAG
Dap-seq
OMalley et al.(2016)
ANAC075_col_a
0.994
0.930
PK27085.1
M01293_2.00
Cannabis sativa
AATTTATT
AATAAATT
PBM
Lambert et al.(2019)
pTH11262
0.994
0.939
NAC010
M07167_2.00
Arabidopsis thaliana
NWWNCTTSWNNNWYAMGHHWYH
DRWDDCKTRWNNNWSAAGNWWN
Dap-seq
OMalley et al.(2016)
SND3_colamp_a
0.970
0.728
NAC010
M07168_2.00
Arabidopsis thaliana
CKTSWNNNWYAMGYW
WRCKTRWNNNWSAMG
Dap-seq
OMalley et al.(2016)
SND3_col_b
0.970
0.728
NAC073
M07221_2.00
Arabidopsis thaliana
CTTSWNNNWYAMGYH
DRCKTRWNNNWSAAG
Dap-seq
OMalley et al.(2016)
SND2_col_a
0.946
0.719
NAC073
M07222_2.00
Arabidopsis thaliana
CKTSWNNNWYACGYW
WRCGTRWNNNWSAMG
Dap-seq
OMalley et al.(2016)
SND2_colamp_a
0.946
0.719
PK11990.1
M01290_2.00
Cannabis sativa
DNAHDNHDNN
NNHDNHDTNH
PBM
Lambert et al.(2019)
pTH11336
0.924
0.746
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA05G36031.1
NAC/NAM
48
189
PAGVKFDPTDQELIEHLEAKIEAKNMKSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQNECDLQGGETRWHKTGKTRPVMVNGKQKGYKKILVLYTNFGKNRKPEKTNWVMHQYHM
GLYMA05G36031.2
NAC/NAM
48
189
PAGVKFDPTDQELIEHLEAKIEAKNMKSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQNECDLQGGETRWHKTGKTRPVMVNGKQKGYKKILVLYTNFGKNRKPEKTNWVMHQYHM
Links
Other
NAC/NAM
family TFs
Other
Glycine max
TFs
350 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_09162
Aegilops tauschii
F775_09162
N
F775_16499
Aegilops tauschii
F775_16499
N
F775_18370
Aegilops tauschii
F775_18370
N
F775_18558
Aegilops tauschii
F775_18558
N
Traes_1AL_3C796C3D3
Triticum aestivum
Traes_1AL_3C796C3D3
N
Traes_1BL_37FA9C770
Triticum aestivum
Traes_1BL_37FA9C770
N
Traes_3DS_31B0043F6
Triticum aestivum
Traes_3DS_31B0043F6
N
Traes_6AS_073DEE100
Triticum aestivum
Traes_6AS_073DEE100
N
Traes_6BS_1AE1C47BC
Triticum aestivum
Traes_6BS_1AE1C47BC
N
Traes_6BS_7F1846171
Triticum aestivum
Traes_6BS_7F1846171
N
Traes_6BS_945FD8DAC1
Triticum aestivum
Traes_6BS_945FD8DAC1
N
Traes_6BS_A3531CD43
Triticum aestivum
Traes_6BS_A3531CD43
N
Traes_6BS_FA68506CF
Triticum aestivum
Traes_6BS_FA68506CF
N
Traes_6DS_1CC9DD1EC
Triticum aestivum
Traes_6DS_1CC9DD1EC
N
Traes_6DS_2185308F3
Triticum aestivum
Traes_6DS_2185308F3
N
Traes_6DS_9E1F83202
Triticum aestivum
Traes_6DS_9E1F83202
N
Traes_6DS_E67EB0CBE
Triticum aestivum
Traes_6DS_E67EB0CBE
N
Traes_7BS_E70858C081
Triticum aestivum
Traes_7BS_E70858C081
N
Traes_7DS_6B1F6F5E5
Triticum aestivum
Traes_7DS_6B1F6F5E5
N
TRIUR3_06575
Triticum urartu
TRIUR3_06575
N