CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA16G26740
(
Glycine max
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
GLYMA16G26740
T293147_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC025
M02368_2.00
Arabidopsis thaliana
YACGYAAY
RTTRCGTR
PBM
Weirauch et al.(2014)
pTH7656
0.879
0.804
NAC047
M07198_2.00
Arabidopsis thaliana
CACGB
VCGTG
Dap-seq
OMalley et al.(2016)
ANAC047_colamp_a
0.876
0.821
NAC047
M07199_2.00
Arabidopsis thaliana
WNNNWYACGYMWYYN
NRRWKRCGTRWNNNW
Dap-seq
OMalley et al.(2016)
ANAC047_col
0.876
0.821
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA16G26740.1
NAC/NAM
10
139
PPGFRFHPTDEELILHYLRKKVASIPLPVAIIAEVDIYKFDPWELPAKAAFGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKNIVASLAGGVREHFGVKKALVFYKGKPPKGVKTNWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Glycine max
TFs
124 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA008381
Oryza indica
BGIOSGA008381
N
0.000
BRADI3G45230
Brachypodium distachyon
BRADI3G45230
N
0.000
F775_27241
Aegilops tauschii
F775_27241
N
0.000
GRMZM2G134439
Zea mays
GRMZM2G134439
N
0.000
GRMZM2G326783
Zea mays
GRMZM2G326783
N
0.000
LPERR02G15710
Leersia perrieri
LPERR02G15710
N
0.000
MLOC_62598
Hordeum vulgare
MLOC_62598
N
0.000
OB02G27300
Oryza brachyantha
OB02G27300
N
0.000
OBART02G19580
Oryza barthii
OBART02G19580
N
0.000
OGLUM02G19870
Oryza glumaepatula
OGLUM02G19870
N
0.000
OLONG_005200
Oryza longistaminata
OLONG_005200
N
0.000
OMERI02G19460
Oryza meridionalis
OMERI02G19460
N
0.000
ONIVA03G19920
Oryza nivara
ONIVA03G19920
N
0.000
OPUNC02G17490
Oryza punctata
OPUNC02G17490
N
0.000
ORGLA02G0167800
Oryza glaberrima
ORGLA02G0167800
N
0.000
ORUFI02G20630
Oryza rufipogon
ORUFI02G20630
N
0.000
OS02G0539600
Oryza sativa
OS02G0539600
N
0.000
Pavir.Ab01874
Panicum virgatum
Pavir.Ab01874
N
0.000
Sb04g005902
Sorghum bicolor
Sb04g005902
N
0.000
Si016284m.g
Setaria italica
Si016284m.g
N
0.000
Traes_6BL_1392D6149
Triticum aestivum
Traes_6BL_1392D6149
N
0.000
Traes_6DL_88259C187
Triticum aestivum
Traes_6DL_88259C187
N
0.000
TRIUR3_27498
Triticum urartu
TRIUR3_27498
N
0.000