CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G042494
(
Zea mays
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
GRMZM2G042494
T293197_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC018
M07176_2.00
Arabidopsis thaliana
DYACGBMAYYD
HRRTKVCGTRH
Dap-seq
OMalley et al.(2016)
NAM_colamp_a
0.911
0.723
NAC018
M07177_2.00
Arabidopsis thaliana
WDNCKWNHNNNWYACGBMA
TKVCGTRWNNNDNWMGNHW
Dap-seq
OMalley et al.(2016)
NAM_col_v3a
0.911
0.723
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G042494_P01
NAC/NAM
11
138
PPGFRFHPTDEELIVNYLRNRAANTPCPVAIIADVDIYKLDPWDLPSRAAYGDKEWYFFSPRDRKYPNGVRPNRAAGSGYWKATGTDKPIHGSATGGSVVGVKKALVFYKGRPPKGAKTNWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Zea mays
TFs
103 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_00688
Capronia coronata
A1O1_00688
N
0.000
A1O5_06529
Cladophialophora psammophila
A1O5_06529
N
0.000
A1O7_00797
Cladophialophora yegresii
A1O7_00797
N
0.000
G647_00846
Cladophialophora carrionii
G647_00846
N
0.000
GGTG_06292
Gaeumannomyces graminis
GGTG_06292
N
0.000
HMPREF1120_06272
Exophiala dermatitidis
HMPREF1120_06272
N
0.000
MAPG_04385
Magnaporthe poae
MAPG_04385
N
0.000
PODANS_2_150
Podospora anserina
PODANS_2_150
I
0.000
PV04_01229
Capronia semiimmersa
PV04_01229
N
0.000
PV05_11230
Exophiala xenobiotica
PV05_11230
N
0.000
PV07_02041
Cladophialophora immunda
PV07_02041
N
0.000
PV11_08310
Exophiala sideris
PV11_08310
N
0.000
Z517_07811
Fonsecaea pedrosoi
Z517_07811
N
0.000
Z519_09135
Cladophialophora bantiana
Z519_09135
N
0.000