CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G127379
(
Zea mays
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
GRMZM2G127379
T293243_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Traes_5BL_CC18CAD72
M11085_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$NAC691_01
0.915
0.847
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G127379_P01
NAC/NAM
24
157
PAGFRFHPTDEELMVHYLMRQAASMPCPVPIIAEVNIYQCNPWDLPAKALFGDKEWFFFSPRDRKYPNGARPNRAAGSGYWKATGTDKAILSSSTPTSHGGANIVVGVKKALVFYGGRPPKGTKTDWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Zea mays
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA034713
Oryza indica
BGIOSGA034713
I
0.909
BGIOSGA036918
Oryza indica
BGIOSGA036918
I
0.909
BGIOSGA036920
Oryza indica
BGIOSGA036920
I
0.909
F775_26965
Aegilops tauschii
F775_26965
I
0.915
MLOC_4747
Hordeum vulgare
MLOC_4747
I
0.915
OB11G11210
Oryza brachyantha
OB11G11210
I
0.926
OB12G11500
Oryza brachyantha
OB12G11500
I
0.927
OBART11G01590
Oryza barthii
OBART11G01590
I
0.909
OBART12G01290
Oryza barthii
OBART12G01290
I
0.909
OGLUM11G01310
Oryza glumaepatula
OGLUM11G01310
I
0.909
OGLUM12G01870
Oryza glumaepatula
OGLUM12G01870
I
0.909
OLONG_020632
Oryza longistaminata
OLONG_020632
I
0.913
OLONG_026749
Oryza longistaminata
OLONG_026749
I
0.909
OMERI12G00480
Oryza meridionalis
OMERI12G00480
I
0.895
ONIVA11G01630
Oryza nivara
ONIVA11G01630
I
0.909
OPUNC11G01330
Oryza punctata
OPUNC11G01330
I
0.928
OPUNC12G01370
Oryza punctata
OPUNC12G01370
I
0.928
ORGLA12G0011400
Oryza glaberrima
ORGLA12G0011400
I
0.909
ORUFI12G01570
Oryza rufipogon
ORUFI12G01570
I
0.877
OS11G0126900
Oryza sativa
OS11G0126900
I
0.909
OS12G0123700
Oryza sativa
OS12G0123700
I
0.909
Pavir.J23516
Panicum virgatum
Pavir.J23516
I
0.915
Sb05g001580
Sorghum bicolor
Sb05g001580
I
0.913
Sb08g001940
Sorghum bicolor
Sb08g001940
I
0.927
Si010410m.g
Setaria italica
Si010410m.g
I
0.930
Si026530m.g
Setaria italica
Si026530m.g
I
0.928
Traes_5BL_CC18CAD72
Triticum aestivum
Traes_5BL_CC18CAD72
D
0.915