CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LPERR01G34330
(
Leersia perrieri
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
LPERR01G34330
T293503_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC035
M07186_2.00
Arabidopsis thaliana
CBTNNNNNDYACGKMAHHN
NDDTKMCGTRHNNNNNAVG
Dap-seq
OMalley et al.(2016)
ANAC034_col
0.949
0.930
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LPERR01G34330.1
NAC/NAM
47
172
MPGFRFHPTEEELIEFYLRRKVEGKRFNVELITFLDLYRYDPWELPAMAAIGEKEWFFYVPRDRKYRNGDRPNRVTASGYWKATGADRMIRAENNRPIGLKKTLVFYSGKAPKGVRSSWIMNEYRL
LPERR01G34330.2
NAC/NAM
47
172
MPGFRFHPTEEELIEFYLRRKVEGKRFNVELITFLDLYRYDPWELPAMAAIGEKEWFFYVPRDRKYRNGDRPNRVTASGYWKATGADRMIRAENNRPIGLKKTLVFYSGKAPKGVRSSWIMNEYRL
Links
Other
NAC/NAM
family TFs
Other
Leersia perrieri
TFs
120 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bm4783
Brugia malayi
Bm4783
I
BTMF_0000353901
Brugia timori
BTMF_0000353901
N
EEL_0001062601
Elaeophora elaphi
EEL_0001062601
I
nDi.2.2.2.g08148
Dirofilaria immitis
nDi.2.2.2.g08148
I
nLs.2.1.2.g09806
Litomosoides sigmodontis
nLs.2.1.2.g09806
I
WUBG_05169
Wuchereria bancrofti
WUBG_05169
I