CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

OGLUM04G19900 *(Oryza glumaepatula)* NAC/NAM
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF02365 (NAM)	IPR003441	OGLUM04G19900	T294139_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
NAC037 M07187_2.00	Arabidopsis thaliana	CKTVNDNHNYAMG	CKTRNDNHNBAMG	Dap-seq OMalley et al.(2016) VND1_col_a	0.910	0.877
NAC007 M07164_2.00	Arabidopsis thaliana	TTRCKTVHDNNNYAMG	CKTRNNNHDBAMGYAA	Dap-seq OMalley et al.(2016) VND4_colamp_a	0.910	0.860
NAC007 M07165_2.00	Arabidopsis thaliana	TGCKTVHDNHDYAMG	CKTRHDNHDBAMGCA	Dap-seq OMalley et al.(2016) VND4_col	0.910	0.860
ANAC076 M07224_2.00	Arabidopsis thaliana	TRCKTVHNNHNYAMG	CKTRNDNNDBAMGYA	Dap-seq OMalley et al.(2016) VND2_col_a	0.898	0.868
ANAC076 M07225_2.00	Arabidopsis thaliana	TTGCKTVHNNHNYAMGYHAHNNN	NNNDTDRCKTRNDNNDBAMGCAA	Dap-seq OMalley et al.(2016) VND2_colamp_a	0.898	0.868
For this family, TFs with SR scores > 0.870* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
OGLUM04G19900.1	NAC/NAM	8	135	PPGFRFHPTDEELVDYYLRKKVALKKIDLDVIKDIDLYKIEPWDLQEQCKIGNEEQNEWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKPIYVKNCLVGMRKTLVFYRGRAPNGQKSDWIMHEYRL

Links
Other NAC/NAM family TFs
Other *Oryza glumaepatula* TFs