CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ORGLA03G0152700 *(Oryza glaberrima)* NAC/NAM
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF02365 (NAM)	IPR003441	ORGLA03G0152700	T294762_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
NAC018 M07176_2.00	Arabidopsis thaliana	DYACGBMAYYD	HRRTKVCGTRH	Dap-seq OMalley et al.(2016) NAM_colamp_a	0.919	0.775
NAC018 M07177_2.00	Arabidopsis thaliana	WDNCKWNHNNNWYACGBMA	TKVCGTRWNNNDNWMGNHW	Dap-seq OMalley et al.(2016) NAM_col_v3a	0.919	0.775
NAC025 M02368_2.00	Arabidopsis thaliana	YACGYAAY	RTTRCGTR	PBM Weirauch et al.(2014) pTH7656	0.886	0.766
NAC047 M07198_2.00	Arabidopsis thaliana	CACGB	VCGTG	Dap-seq OMalley et al.(2016) ANAC047_colamp_a	0.881	0.784
NAC047 M07199_2.00	Arabidopsis thaliana	WNNNWYACGYMWYYN	NRRWKRCGTRWNNNW	Dap-seq OMalley et al.(2016) ANAC047_col	0.881	0.784
For this family, TFs with SR scores > 0.870* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ORGLA03G0152700.1	NAC/NAM	10	139	PPGFRFHPTDEELIVHYLRNRAASSPCPVSIIADVDIYKFDPWDLPSKANYGDREWYFFSPRDRKYPNGIRPNRAAGSGYWKATGTDKPIHSSGGAATNESVGVKKALVFYKGRPPKGTKTNWIMHEYRL

Links
Other NAC/NAM family TFs
Other *Oryza glaberrima* TFs