CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OS03G0327800
(
Oryza sativa
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
OS03G0327800
T295017_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC018
M07176_2.00
Arabidopsis thaliana
DYACGBMAYYD
HRRTKVCGTRH
Dap-seq
OMalley et al.(2016)
NAM_colamp_a
0.915
0.766
NAC018
M07177_2.00
Arabidopsis thaliana
WDNCKWNHNNNWYACGBMA
TKVCGTRWNNNDNWMGNHW
Dap-seq
OMalley et al.(2016)
NAM_col_v3a
0.915
0.766
NAC025
M02368_2.00
Arabidopsis thaliana
YACGYAAY
RTTRCGTR
PBM
Weirauch et al.(2014)
pTH7656
0.881
0.757
NAC047
M07198_2.00
Arabidopsis thaliana
CACGB
VCGTG
Dap-seq
OMalley et al.(2016)
ANAC047_colamp_a
0.875
0.775
NAC047
M07199_2.00
Arabidopsis thaliana
WNNNWYACGYMWYYN
NRRWKRCGTRWNNNW
Dap-seq
OMalley et al.(2016)
ANAC047_col
0.875
0.775
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OS03T0327800-01
NAC/NAM
10
139
PPGFRFHPTDEELIVHYLRNRAASSPCPVSIIADVDIYKFDPWDLPSKENYGDREWYFFSPRDRKYPNGIRPNRAAGSGYWKATGTDKPIHSSGGAATNESVGVKKALVFYKGRPPKGTKTNWIMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Oryza sativa
TFs
180 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cmyd_10014540
Chelonia mydas
Cmyd_10014540
I
prox1b
Danio rerio
ENSDARG00000088810
I
ENSGMOG00000001679
Gadus morhua
ENSGMOG00000001679
I
ENSGMOG00000015166
Gadus morhua
ENSGMOG00000015166
I
ENSMEUG00000013465
Macropus eugenii
ENSMEUG00000013465
I
ENSONIG00000013505
Oreochromis niloticus
ENSONIG00000013505
N
ENSORLG00000005386
Oryzias latipes
ENSORLG00000005386
N
ENSPFOG00000006645
Poecilia formosa
ENSPFOG00000006645
N
ENSTNIG00000013016
Tetraodon nigroviridis
ENSTNIG00000013016
N
ENSTRUG00000012738
Takifugu rubripes
ENSTRUG00000012738
I
ENSXMAG00000008639
Xiphophorus maculatus
ENSXMAG00000008639
N