CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400040550
(
Solanum tuberosum
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
PGSC0003DMG400040550
T295187_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400090979
NAC/NAM
4
129
PMGIRFHPTDTELINYLKRFFKGELCLNEECPIQFADIYGDQPPWEIFGANFEEKFRYFITPLKKQKTEYKRFSRICAKGTWQGQTGEHLIRRNRTAPVVGFKRNLKFKTSECGQNNTWLMVEYHV
Links
Other
NAC/NAM
family TFs
Other
Solanum tuberosum
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R001472
Calypte anna
Aan_R001472
N
Afo_R013021
Aptenodytes forsteri
Afo_R013021
N
Alligator_sinensis_CCG015430.1
Alligator sinensis
Alligator_sinensis_CCG015430.1
N
Brh_R004016
Buceros rhinoceros
Brh_R004016
N
Cmyd_10020922
Chelonia mydas
Cmyd_10020922
N
PRDM2
Anolis carolinensis
ENSACAG00000010749
N
ENSAMEG00000006714
Ailuropoda melanoleuca
ENSAMEG00000006714
N
ENSAPLG00000014764
Anas platyrhynchos
ENSAPLG00000014764
N
PRDM2
Bos taurus
ENSBTAG00000020552
N
ENSCAFG00000016361
Canis familiaris
ENSCAFG00000016361
N
PRDM2
Equus caballus
ENSECAG00000008911
N
PRDM2
Erinaceus europaeus
ENSEEUG00000014607
N
ENSGALG00000004089
Gallus gallus
ENSGALG00000004089
N
PRDM2
Meleagris gallopavo
ENSMGAG00000005888
N
PRDM2
Myotis lucifugus
ENSMLUG00000006969
N
ENSMPUG00000016352
Mustela putorius furo
ENSMPUG00000016352
N
PRDM2
Ornithorhynchus anatinus
ENSOANG00000009908
N
ENSP00000235372-D1
Bos grunniens
ENSP00000235372-D1
N
ENSPSIG00000005394
Pelodiscus sinensis
ENSPSIG00000005394
N
PRDM2
Tursiops truncatus
ENSTTRG00000005029
N
Gfo_R002647
Geospiza fortis
Gfo_R002647
N
Myotis_brandtii_PRDM2_10022047
Myotis brandtii
Myotis_brandtii_PRDM2_10022047
N
Ogr07692
Ophisaurus gracilis
Ogr07692
N
prdm2
Xenopus tropicalis
XB-GENE-5957530
N